RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 FNDC9Q8TBE3 224 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 PTDSS2Q9BVG9 487 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 SELENOIQ9C0D9 397 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 PRDM14Q9GZV8 571 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 GLIPR2Q9H4G4 154 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 DKK4Q9UBT3 224 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 PCYT1BQ9Y5K3 369 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 URGCP-MRPS24S4R325 110 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 SMIM30A4D0T7 59 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 MSTNO14793 375 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 C1QL1O75973 258 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 TGFAP01135 160 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 MT-ND4P03905 459 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 OR4E1P0C645 316 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 LINC00614P0C842 121 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 NID1P14543 1247 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 KIR3DL2P43630 455 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 CAMLGP49069 296 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 FLI1Q01543 452 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 LTBQ06643 244 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 VMA21Q3ZAQ7 101 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF362Q5T0B9 420 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 PXDC1Q5TGL8 231 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 SLC35F2Q8IXU6 374 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 ST8SIA1Q92185 356 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 SORCS2Q96PQ0 1159 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 CLN8Q9UBY8 286 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 HDGFL3Q9Y3E1 203 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 PUS1Q9Y606 427 aaKnown RBP eCLIP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF462Q96JM2 2506 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 ZFP92A6NM28 416 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF716A6NP11 495 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF736B4DX44 427 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 GUSBP08236 651 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 TBCEQ15813 527 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 GGTA1PQ4G0N0 100 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 RBPMS2Q6ZRY4 209 aaKnown RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 FAM71CQ8NEG0 241 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 OR52L2PQ8NGH6 319 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 RDH12Q96NR8 316 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 POFUT1Q9H488 388 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 GP6Q9HCN6 339 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 MED29Q9NX70 200 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 EHFQ9NZC4 300 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 SPRR3Q9UBC9 169 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 MLXQ9UH92 298 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 AUP1Q9Y679 476 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 TRBV5-4A0A0C4DH59 114 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF729A6NN14 1252 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 TRDCB7Z8K6 153 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF593O00488 134 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 SIAH2O43255 324 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 LAMP1P11279 417 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 RAB3BP20337 219 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 LCN1P31025 176 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 ID1P41134 155 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 MAP2K6P52564 334 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 OR10A3P58181 314 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 TAS2R46P59540 309 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 RPUSD3Q6P087 351 aaKnown RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 NEU4Q8WWR8 484 aaPredicted RBP2.62□□□□□ -1.99
NEDD4-208ENST00000508342 SLC25A28Q96A46 364 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 CLEC5AQ9NY25 188 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 UBQLN2Q9UHD9 624 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 OAZ3Q9UMX2 235 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 PPP1R3CQ9UQK1 317 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 COL4A2P08572 1712 aa2.62□□□□□ -1.99
NEDD4-208ENST00000508342 A0A1W2PRX2 142 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF99A8MXY4 864 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-208ENST00000508342 F5H697 171 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 MS4A18H0YCH9 400 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 PTP4A3O75365 173 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 SORBS2O94875 1100 aaKnown RBP2.61□□□□□ -1.99
NEDD4-208ENST00000508342 MT-ATP6P00846 226 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 SMIM6P0DI80 62 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 BMP2P12643 396 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 RPA2P15927 270 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 USF1P22415 310 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-208ENST00000508342 BDKRB2P30411 391 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 SLC37A1P57057 533 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 CXCR4P61073 352 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 LCN2P80188 198 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 MS4A18Q3C1V0 323 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 HIKESHIQ53FT3 197 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 C4orf48Q5BLP8 95 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 LIPKQ5VXJ0 399 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 DHRS7BQ6IAN0 325 aaPredicted RBP2.61□□□□□ -1.99
NEDD4-208ENST00000508342 KCTD20Q7Z5Y7 419 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 DPPA2Q7Z7J5 298 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 CATSPERDQ86XM0 798 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 CPOQ8IVL8 374 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 SKA3Q8IX90 412 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 LINC01356Q8N9X3 169 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 SEMA6DQ8NFY4 1073 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 OR52H1Q8NGJ2 320 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 OR5D18Q8NGL1 313 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 OR13C9Q8NGT0 318 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 ADAMTS16Q8TE57 1224 aa2.61□□□□□ -1.99
NEDD4-208ENST00000508342 TFAP2CQ92754 450 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms