RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 SRSF4Q08170 494 aaKnown RBP16.37■□□□□ 0.21
UBE2D3-220ENST00000505307 TMEM236Q5W0B7 351 aa16.37■□□□□ 0.21
UBE2D3-220ENST00000505307 COMMD2Q86X83 199 aa16.37■□□□□ 0.21
UBE2D3-220ENST00000505307 OR5D13Q8NGL4 314 aa16.37■□□□□ 0.21
UBE2D3-220ENST00000505307 PBOV1Q9GZY1 135 aa16.37■□□□□ 0.21
UBE2D3-220ENST00000505307 C16orf95Q9H693 158 aa16.37■□□□□ 0.21
UBE2D3-220ENST00000505307 IGLV3-1P01715 115 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 PSG2P11465 335 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 TGFBR2P37173 567 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 GABRA2P47869 451 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 HCCSP53701 268 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 PROK1P58294 105 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 ACTR3P61158 418 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 DEFA6Q01524 100 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 TAF9Q16594 264 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 DHRS7BQ6IAN0 325 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 AQP3Q92482 292 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 SDSLQ96GA7 329 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 OR8B4Q96RC9 309 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 MNTQ99583 582 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 MMP27Q9H306 513 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 NUFIP1Q9UHK0 495 aaKnown RBP16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 ENPP5Q9UJA9 477 aa16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 SF3B6Q9Y3B4 125 aaKnown RBP16.36■□□□□ 0.21
UBE2D3-220ENST00000505307 IGKV1D-17A0A075B6S4 117 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 MEIOCA2RUB1 952 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 RHBDL1O75783 438 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 TSPAN9O75954 239 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 ESRRGP62508 458 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 CEP78Q5JTW2 689 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 FAHD1Q6P587 224 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 MOB3CQ70IA8 216 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 OR51E1Q8TCB6 317 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 DUS3LQ96G46 650 aaKnown RBP16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 CNN2Q99439 309 aaKnown RBP16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 MOB1AQ9H8S9 216 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 GPR84Q9NQS5 396 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 ZNF222Q9UK12 451 aa16.35■□□□□ 0.21
UBE2D3-220ENST00000505307 A0A1W2PPH5 198 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 CCDC182A6NF36 153 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 DHRS3O75911 302 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 MRPL3P09001 348 aaKnown RBP16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 SAA4P35542 130 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 PTGES3Q15185 160 aaKnown RBP16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 SMIM21Q3B7S5 101 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 PDLIM3Q53GG5 364 aaPredicted RBP16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 PLCXD3Q63HM9 321 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 HAGHLQ6PII5 290 aaPredicted RBP16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 Q6ZSV7 163 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 TMEM185AQ8NFB2 350 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 SEMA6AQ9H2E6 1030 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 H2AFY2Q9P0M6 372 aaPredicted RBP16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 IKZF2Q9UKS7 526 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 POMPQ9Y244 141 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 PIGLQ9Y2B2 252 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 MAB21L2Q9Y586 359 aa16.34■□□□□ 0.21
UBE2D3-220ENST00000505307 SLC22A31A6NKX4 558 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 H0YAE9 185 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 PSMD9O00233 223 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 NRASP01111 189 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 KLRD1Q13241 179 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 MIDNQ504T8 468 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 ZNF684Q5T5D7 378 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 ASPHD2Q6ICH7 369 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 ZNF573Q86YE8 665 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 POC1AQ8NBT0 407 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 ZNRF1Q8ND25 227 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 BEND2Q8NDZ0 799 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 FAM234AQ9H0X4 552 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 TCF7L1Q9HCS4 588 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 WNK1Q9H4A3 2382 aa16.33■□□□□ 0.2
UBE2D3-220ENST00000505307 A0A1W2PRD5 423 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 A0A1W2PRF3 423 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 A0A1W2PRM7 423 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 NOS1APO75052 506 aaPredicted RBP16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 DNAJC8O75937 253 aaPredicted RBP16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 FAHP16930 419 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 KRTAP10-3P60369 221 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 CLVS2Q5SYC1 327 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 ZNF322Q6U7Q0 402 aaPredicted RBP16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 ACP7Q6ZNF0 438 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 MEPCEQ7L2J0 689 aaKnown RBP16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 ZNF561Q8N587 486 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 OR5K1Q8NHB7 308 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 RBM4BQ9BQ04 359 aaKnown RBP16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.32■□□□□ 0.24e-10■■■□□ 19.2
UBE2D3-220ENST00000505307 COPS3Q9UNS2 423 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 POLDIP2Q9Y2S7 368 aa16.32■□□□□ 0.2
UBE2D3-220ENST00000505307 hCG_1809904A0A1W2PP81 198 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 A0A1W2PPE2 198 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 A0A1W2PR64 198 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 A0A1W2PRV1 198 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 ANKRD61A6NGH8 418 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 DHRS7CA6NNS2 312 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 LOC110117498-PIK3R3F6TDL0 507 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 SLC1A7O00341 560 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 DLGAP1O14490 977 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 PRKYO43930 277 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 TTRP02766 147 aa16.31■□□□□ 0.2
UBE2D3-220ENST00000505307 TFF1P04155 84 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms