RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 HFEQ30201 348 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 UTS2BQ765I0 119 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 WDR86Q86TI4 376 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 SERPINA12Q8IW75 414 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 PARP16Q8N5Y8 322 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 OR1M1Q8NGA1 313 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 OR5A2Q8NGI9 324 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 OR5D14Q8NGL3 314 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 OR13C9Q8NGT0 318 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 OR11L1Q8NGX0 322 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 TRMT10AQ8TBZ6 339 aaKnown RBP8.47□□□□□ -1.05
NUP54-203ENST00000504173 NPRL2Q8WTW4 380 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 CCL17Q92583 94 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 THRSPQ92748 146 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 YIPF5Q969M3 257 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 ERGIC1Q969X5 290 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 OR14A2Q96R54 314 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 FGF23Q9GZV9 251 aaPredicted RBP8.47□□□□□ -1.05
NUP54-203ENST00000504173 ZCCHC4Q9H5U6 513 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 FN3KRPQ9HA64 309 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 NEK6Q9HC98 313 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 GCM1Q9NP62 436 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 UFSP2Q9NUQ7 469 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 TAS2R4Q9NYW5 299 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 TREM2Q9NZC2 230 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 PPP1R3CQ9UQK1 317 aa8.47□□□□□ -1.05
NUP54-203ENST00000504173 FAM230AA0A1W2PPH8 454 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 A0A1W2PPK0 400 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 MAGEA13PA6NCF6 341 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 TRIM64CA6NLI5 447 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 LRRC30A6NM36 301 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 CCRL2O00421 344 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 RGS9O75916 674 aaPredicted RBP8.46□□□□□ -1.06
NUP54-203ENST00000504173 PTBP3O95758 552 aaKnown RBP8.46□□□□□ -1.06
NUP54-203ENST00000504173 SMIM18P0DKX4 95 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 IRF2P14316 349 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 RAB3AP20336 220 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 PRKACBP22694 351 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 AZGP1P25311 298 aaKnown RBP8.46□□□□□ -1.06
NUP54-203ENST00000504173 PSMA1P25786 263 aaKnown RBP8.46□□□□□ -1.06
NUP54-203ENST00000504173 GABRA5P31644 462 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 GATA4P43694 442 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 DSCR9P59020 149 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 PPP3R1P63098 170 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 ZNF154Q13106 437 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 MPPED2Q15777 294 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 SSX1Q16384 188 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 CLEC12BQ2HXU8 276 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 ACSM3Q53FZ2 586 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 SYT6Q5T7P8 510 aaPredicted RBP8.46□□□□□ -1.06
NUP54-203ENST00000504173 HIST2H2BDQ6DRA6 164 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 ZNF420Q8TAQ5 688 aaPredicted RBP8.46□□□□□ -1.06
NUP54-203ENST00000504173 FAM168AQ92567 244 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 HPS1Q92902 700 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 MUL1Q969V5 352 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 BORCS8Q96FH0 119 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 DERL3Q96Q80 235 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 OCEL1Q9H607 264 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 CHODLQ9H9P2 273 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 TMEM106BQ9NUM4 274 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 NDUFB11Q9NX14 153 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 CKLFQ9UBR5 152 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 CACNG2Q9Y698 323 aa8.46□□□□□ -1.06
NUP54-203ENST00000504173 TENM1Q9UKZ4 2725 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 TRBV5-7A0A0A0MS05 114 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 IGKV1-9A0A0C4DH69 117 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 hCG_1807616A0A1W2PRN6 198 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 PQLC2LA1A4F0 135 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 LRP5LA4QPB2 252 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 CLDN25C9JDP6 229 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 IFNL4K9M1U5 179 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 PPIHO43447 177 aaKnown RBP8.45□□□□□ -1.06
NUP54-203ENST00000504173 SULT1B1O43704 296 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 RP2O75695 350 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 HCKP08631 526 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 FAM157CP0CG43 387 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 FUT6P51993 359 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 GP2P55259 537 aaKnown RBP8.45□□□□□ -1.06
NUP54-203ENST00000504173 HNRNPA0Q13151 305 aaKnown RBP8.45□□□□□ -1.06
NUP54-203ENST00000504173 INSL4Q14641 139 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 ZNF826PQ6ZT77 177 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 LHFPL2Q6ZUX7 228 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 CEACAM19Q7Z692 300 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 ZNF573Q86YE8 665 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 DNAAF1Q8NEP3 725 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 C10orf105Q8TEF2 133 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 RPL3LQ92901 407 aaKnown RBP8.45□□□□□ -1.06
NUP54-203ENST00000504173 SPSB1Q96BD6 273 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 ORAI1Q96D31 301 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 TIMD4Q96H15 378 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 PIMREGQ9BSJ6 248 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 MRPS26Q9BYN8 205 aaKnown RBP8.45□□□□□ -1.06
NUP54-203ENST00000504173 OR51I2Q9H344 312 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 NOX4Q9NPH5 578 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 C1orf123Q9NWV4 160 aa8.45□□□□□ -1.06
NUP54-203ENST00000504173 SF3B6Q9Y3B4 125 aaKnown RBP8.45□□□□□ -1.06
NUP54-203ENST00000504173 TANC2Q9HCD6 1990 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 DYSFO75923 2080 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 IGHV4-30-2A0A087WSY4 118 aa8.44□□□□□ -1.06
NUP54-203ENST00000504173 J3QT63 122 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms