RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 PECRQ9BY49 303 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 LINC00470Q9BZP3 86 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 NMES1Q9C002 83 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 SPRY4Q9C004 299 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 SLC25A32Q9H2D1 315 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 PPA2Q9H2U2 334 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 ELL3Q9HB65 397 aaPredicted RBP10.47□□□□□ -0.73
NUP54-202ENST00000502850 PARPBPQ9NWS1 579 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 RDH8Q9NYR8 311 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 TNFSF18Q9UNG2 199 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 GPR132Q9UNW8 380 aa10.47□□□□□ -0.73
NUP54-202ENST00000502850 LOC100509620A0A075B734 347 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 IGKV3D-15A0A087WSY6 115 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 DBX1A6NMT0 343 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 E9PLN8 166 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 RRP8O43159 456 aaKnown RBP10.46□□□□□ -0.74
NUP54-202ENST00000502850 BCL2L11O43521 198 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 CSTBP04080 98 aaKnown RBP10.46□□□□□ -0.74
NUP54-202ENST00000502850 LCATP04180 440 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 HPNP05981 417 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 ZNF32P17041 273 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 AKR1C4P17516 323 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 M6PRP20645 277 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 SNU13P55769 128 aaKnown RBP10.46□□□□□ -0.74
NUP54-202ENST00000502850 MTCP1P56278 107 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 CHRFAM7AQ494W8 412 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 ZNF774Q6NX45 483 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 PIP4P1Q86T03 277 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 LHFPL1Q86WI0 220 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 PDZD9Q8IXQ8 264 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 OR5AP2Q8NGF4 316 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 NPRL2Q8WTW4 380 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 EMG1Q92979 244 aaKnown RBP10.46□□□□□ -0.74
NUP54-202ENST00000502850 RBPMSQ93062 196 aaKnown RBP10.46□□□□□ -0.74
NUP54-202ENST00000502850 ALKBH3Q96Q83 286 aaPredicted RBP10.46□□□□□ -0.74
NUP54-202ENST00000502850 OR2H1Q9GZK4 316 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 GPR35Q9HC97 309 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 RAB18Q9NP72 206 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 HSF4Q9ULV5 492 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 SLC7A11Q9UPY5 501 aa10.46□□□□□ -0.74
NUP54-202ENST00000502850 A0A1W2PP11 408 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 RAD51DO75771 328 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 SYNGR4O95473 234 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 SFT2D2O95562 160 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 DBHP09172 617 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 PET100P0DJ07 73 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 TMEM225BP0DP42 221 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 CD59P13987 128 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 B4GALT1P15291 398 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 DLSTP36957 453 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 RBP2P50120 134 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 FOXC1Q12948 553 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 RSU1Q15404 277 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 CEACAM16Q2WEN9 425 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 SNAI3Q3KNW1 292 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 CDCP2Q5VXM1 449 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 OR2M7Q8NG81 312 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 OR5D18Q8NGL1 313 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 OR5M9Q8NGP3 310 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 CASTOR1Q8WTX7 329 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 PPP1R1CQ8WVI7 109 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 ROBO4Q8WZ75 1007 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 PSMF1Q92530 271 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 PIGTQ969N2 578 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 BORCS8Q96FH0 119 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 Q96M66 194 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 DHRS9Q9BPW9 319 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 ZNF703Q9H7S9 590 aaPredicted RBP10.45□□□□□ -0.74
NUP54-202ENST00000502850 IL36GQ9NZH8 169 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 C14orf166Q9Y224 244 aaKnown RBP10.45□□□□□ -0.74
NUP54-202ENST00000502850 NCKAP5O14513 1909 aa10.45□□□□□ -0.74
NUP54-202ENST00000502850 FIGNL2A6NMB9 653 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 FAM25EA8MYX2 175 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 C9orf172C9J069 976 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 MRPL33O75394 65 aaKnown RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 SERPINA5P05154 406 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 NMBP08949 121 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 RFPL3SP0C7P2 107 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 LIPCP11150 499 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 ZP3P21754 424 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 DTYMKP23919 212 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 FUT6P51993 359 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 ATP1B3P54709 279 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 CLDN15P56746 228 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 FOXO1Q12778 655 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 BAMBIQ13145 260 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 TMEM42Q69YG0 159 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 ZNF660Q6AZW8 331 aaPredicted RBP10.44□□□□□ -0.74
NUP54-202ENST00000502850 ASCL4Q6XD76 172 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 KCTD9Q7L273 389 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 RNF144BQ7Z419 303 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 PXT1Q8NFP0 134 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 ST8SIA2Q92186 375 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 PRDM14Q9GZV8 571 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 RNF122Q9H9V4 155 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 GPR173Q9NS66 373 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 DEPPQ9NTK1 212 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 PLEKHJ1Q9NW61 149 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 EHFQ9NZC4 300 aa10.44□□□□□ -0.74
NUP54-202ENST00000502850 MCTS1Q9ULC4 181 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms