RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 ERI3O43414 337 aaKnown RBP0.83□□□□□ -2.28
SMAD1-203ENST00000502342 XRCC2O43543 280 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 CTNSO60931 367 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 HLA-HP01893 362 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 KRT14P02533 472 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 IFNW1P05000 195 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 CXCR1P25024 350 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 NBL1P41271 181 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 MTPNP58546 118 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 RPS15AP62244 130 aaKnown RBP0.83□□□□□ -2.28
SMAD1-203ENST00000502342 RPS15P62841 145 aaKnown RBP0.83□□□□□ -2.28
SMAD1-203ENST00000502342 DEFB103AP81534 67 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 ZNF33AQ06730 810 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 MERTKQ12866 999 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 TSC22D1Q15714 1073 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 EIF3MQ7L2H7 374 aaKnown RBP0.83□□□□□ -2.28
SMAD1-203ENST00000502342 SSX9Q7RTT3 188 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 TMEM144Q7Z5S9 345 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 SCD5Q86SK9 330 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 ZDHHC22Q8N966 263 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 OR52E5Q8NH55 327 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 ORAOV1Q8WV07 137 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.83□□□□□ -2.28
SMAD1-203ENST00000502342 MCUR1Q96AQ8 359 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 APH1AQ96BI3 265 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 FXYD5Q96DB9 178 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 RNF170Q96K19 258 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 C20orf166-AS1Q96NR2 134 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 PANX1Q96RD7 426 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 TMEM175Q9BSA9 504 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 SND1-IT1Q9HBX3 110 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 C20orf96Q9NUD7 363 aaPredicted RBP0.83□□□□□ -2.28
SMAD1-203ENST00000502342 GCNT4Q9P109 453 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 DDX19BQ9UMR2 479 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 ZNF257Q9Y2Q1 563 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 TENM1Q9UKZ4 2725 aa0.83□□□□□ -2.28
SMAD1-203ENST00000502342 NPHP4O75161 1426 aaPredicted RBP0.82□□□□□ -2.28
SMAD1-203ENST00000502342 IGHV6-1A0A0B4J1U7 121 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 LINC01619G3V211 115 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 RGS5O15539 181 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 CACNG3O60359 315 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 AGTP01019 485 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 IGHV3-53P01767 116 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 HLA-GP17693 338 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 GZMHP20718 246 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 RCN1Q15293 331 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 STEAP4Q687X5 459 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 COMTD1Q86VU5 262 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 OR2M7Q8NG81 312 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 ITFG1Q8TB96 612 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 FAM57AQ8TBR7 257 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 NRGNQ92686 78 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 PPP1R36Q96LQ0 422 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 REEP1Q9H902 201 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 ABCB9Q9NP78 766 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 ADA2Q9NZK5 511 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 PPIL1Q9Y3C6 166 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 ZNF337Q9Y3M9 751 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 DYSFO75923 2080 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 HELZ2Q9BYK8 2649 aaKnown RBP0.82□□□□□ -2.28
SMAD1-203ENST00000502342 JCADQ9P266 1359 aa0.82□□□□□ -2.28
SMAD1-203ENST00000502342 SETD1AO15047 1707 aaKnown RBP0.81□□□□□ -2.28
SMAD1-203ENST00000502342 DOCK6Q96HP0 2047 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 KCNE1BA0A087WTH5 132 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 TRAV8-6A0A0B4J262 113 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 A0A0B4J2C4 111 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 A0A1W2PNM2 257 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 K7ERS5 55 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 MPDU1O75352 247 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 FCN3O75636 299 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 OXTP01178 125 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 P0DMU3 169 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 FAM231AP0DMU4 169 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 FAM231CP0DMU5 169 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 SLC6A1P30531 599 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 GNRHRP30968 328 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 PSMB2P49721 201 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 RAB11AP62491 216 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 ENDOGQ14249 297 aaKnown RBP0.81□□□□□ -2.28
SMAD1-203ENST00000502342 SPANXN2Q5MJ10 180 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 TTC19Q6DKK2 380 aaPredicted RBP0.81□□□□□ -2.28
SMAD1-203ENST00000502342 THOC7Q6I9Y2 204 aaKnown RBP0.81□□□□□ -2.28
SMAD1-203ENST00000502342 ZNF322Q6U7Q0 402 aaPredicted RBP0.81□□□□□ -2.28
SMAD1-203ENST00000502342 SLC7A5P1Q8MH63 180 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 CA5BP1Q8WTZ4 195 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 ING5Q8WYH8 240 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 JSRP1Q96MG2 331 aaPredicted RBP0.81□□□□□ -2.28
SMAD1-203ENST00000502342 CCDC77Q9BR77 488 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 THTPAQ9BU02 230 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 STMN4Q9H169 189 aaPredicted RBP0.81□□□□□ -2.28
SMAD1-203ENST00000502342 RDH14Q9HBH5 336 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 TMEM38BQ9NVV0 291 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 VWDEQ8N2E2 1590 aa0.81□□□□□ -2.28
SMAD1-203ENST00000502342 A0A1W2PRD5 423 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 LEUTXA8MZ59 168 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 C9JQL5 133 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 SLC31A1O15431 190 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 PSIP1O75475 530 aaKnown RBP0.8□□□□□ -2.28
SMAD1-203ENST00000502342 SMC2O95347 1197 aa0.8□□□□□ -2.28
SMAD1-203ENST00000502342 PTTG1O95997 202 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms