RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 RNF125Q96EQ8 232 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 VAT1Q99536 393 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 CHCHD6Q9BRQ6 235 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 MROQ9BYG7 248 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 PARP12Q9H0J9 701 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 OR51B5Q9H339 312 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 EVA1AQ9H8M9 152 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 MRPL47Q9HD33 250 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 Q9N2K0 584 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 MS4A12Q9NXJ0 267 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 KCTD5Q9NXV2 234 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 TERF2IPQ9NYB0 399 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 EURLQ9NYK6 297 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 DHRS4-AS1Q9P1J3 65 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 CYSLTR1Q9Y271 337 aa1.2□□□□□ -2.22
XRN1-214ENST00000498077 UBR5O95071 2799 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 ZNF469Q96JG9 3925 aaPredicted RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 MYO18AQ92614 2054 aaKnown RBP1.2□□□□□ -2.22
XRN1-214ENST00000498077 MEIKINA0A087WXM9 373 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 A0A1W2PS18 150 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MBD3L4A6NDZ8 208 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 LILRA5A6NI73 299 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MBD3L5A6NJ08 208 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 F5H0A9 414 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 PRMT5O14744 637 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 FGF16O43320 207 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 STX6O43752 255 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ENTPD6O75354 484 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TFPTP0C1Z6 253 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PGCP20142 388 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 BTF3P20290 206 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 USF1P22415 310 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 PEX2P28328 305 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FCER1GP30273 86 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 NUDT1P36639 197 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CASP2P42575 452 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PTGFRP43088 359 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PPP3CAQ08209 521 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF763Q0D2J5 394 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TRIP13Q15645 432 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 HLA-DRB5Q30154 266 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 DCAF4L1Q3SXM0 396 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TMEM97Q5BJF2 176 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 C19orf54Q5BKX5 351 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 LIPJQ5W064 366 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 Q6ZSA8 131 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF761Q86XN6 746 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 ST6GALNAC3Q8NDV1 305 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 RP9Q8TA86 221 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 DLX4Q92988 240 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF707Q96C28 371 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 TBATAQ96M53 351 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 DACH2Q96NX9 599 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TSSK2Q96PF2 358 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 MS4A10Q96PG2 267 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 KLHDC3Q9BQ90 382 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 BBS2Q9BXC9 721 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ITPAQ9BY32 194 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ALG9Q9H6U8 611 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TMEM206Q9H813 350 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 HRASLSQ9HDD0 168 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SLC17A5Q9NRA2 495 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 FGFR1OP2Q9NVK5 253 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 RMND1Q9NWS8 449 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CGGBP1Q9UFW8 167 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 TBC1D24Q9ULP9 559 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 POLR3KQ9Y2Y1 108 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 MUC22E2RYF6 1773 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 ELP1O95163 1332 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 A0A0U1RQF3 1178 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 URADA6NGE7 173 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 IGLON5A6NGN9 336 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR51F1A6NGY5 319 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 EFCAB9A8MZ26 197 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 F8W8V4 182 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PYCARD-AS1I3L0S3 204 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SLC1A7O00341 560 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 SLC9A3R1O14745 358 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 NME2P1O60361 137 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PLOD3O60568 738 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PROP1O75360 226 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CELA2AP08217 269 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CEBPGP53567 150 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 HCCSP53701 268 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 EXOC3L2Q2M3D2 409 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 PCGF3Q3KNV8 242 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CD276Q5ZPR3 534 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 RBM43Q6ZSC3 357 aaKnown RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF833PQ6ZTB9 187 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 HTR3DQ70Z44 454 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF695Q8IW36 515 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 CMTM4Q8IZR5 234 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF491Q8N8L2 437 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 TEX45Q8NA69 505 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 OR2AJ1Q8NGZ0 328 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 METTL6Q8TCB7 284 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 THAP3Q8WTV1 239 aaPredicted RBP1.19□□□□□ -2.22
XRN1-214ENST00000498077 ZNF606Q8WXB4 792 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 ANKRD7Q92527 254 aa1.19□□□□□ -2.22
XRN1-214ENST00000498077 USP6NLQ92738 828 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms