RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SOSTQ9BQB4 213 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 SLC22A4Q9H015 551 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 ABCG5Q9H222 651 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 ESRP2Q9H6T0 727 aaKnown RBP12.12□□□□□ -0.47
VPS26A-209ENST00000497564 GHRLQ9UBU3 117 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 GPR160Q9UJ42 338 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 V9GYH0 126 aa12.12□□□□□ -0.47
VPS26A-209ENST00000497564 IGLV3-9A0A075B6K5 115 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 IGKV1-27A0A075B6S5 117 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 TMEM272A0A1B0GTI8 110 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 PQLC2LA1A4F0 135 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 OR5B21A6NL26 309 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 ABCD4O14678 606 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 LILRA1O75019 489 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 CTAG2O75638 210 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 EIF4EP06730 217 aaKnown RBP12.11□□□□□ -0.47
VPS26A-209ENST00000497564 ARSBP15848 533 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 RAB6AP20340 208 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 CD40LGP29965 261 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 ATP1B3P54709 279 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 MTCP1P56278 107 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 QRFPP83859 136 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 CNIH2Q6PI25 160 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 OR2W3Q7Z3T1 314 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 TMEM200AQ86VY9 491 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 ANGPTL5Q86XS5 388 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 OR8G5Q8NG78 346 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 SYNPRQ8TBG9 265 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 NPRL2Q8WTW4 380 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 OR5P3Q8WZ94 311 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 SLC25A38Q96DW6 304 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 RADILQ96JH8 1075 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 C1orf147Q96MC9 270 aaPredicted RBP12.11□□□□□ -0.47
VPS26A-209ENST00000497564 SPACA5Q96QH8 159 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 GPER1Q99527 375 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 PPP1R3EQ9H7J1 279 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 ZNF442Q9H7R0 627 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 RABL2AQ9UBK7 228 aaPredicted RBP12.11□□□□□ -0.47
VPS26A-209ENST00000497564 RABL2BQ9UNT1 228 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 MRPS28Q9Y2Q9 187 aaKnown RBP12.11□□□□□ -0.47
VPS26A-209ENST00000497564 F8P00451 2351 aa12.11□□□□□ -0.47
VPS26A-209ENST00000497564 TUBAL3A6NHL2 446 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 TPPPO94811 219 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 PTGFRP43088 359 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 OR3A4PP47883 348 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 ART1P52961 327 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 PPP5CP53041 499 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 MSMPQ1L6U9 139 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 BEX5Q5H9J7 111 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 AWAT2Q6E213 333 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 ASCL4Q6XD76 172 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 BHLHE23Q8NDY6 225 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 HIST1H2AAQ96QV6 131 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 NKX3-1Q99801 234 aaPredicted RBP12.1□□□□□ -0.47
VPS26A-209ENST00000497564 FGF23Q9GZV9 251 aaPredicted RBP12.1□□□□□ -0.47
VPS26A-209ENST00000497564 LIME1Q9H400 295 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 RHBDL2Q9NX52 303 aa12.1□□□□□ -0.47
VPS26A-209ENST00000497564 ROS1P08922 2347 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 FAM230AA0A1W2PPH8 454 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 FAM221AA4D161 298 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 FABP12A6NFH5 140 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 A6NNC1 897 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 TMEM14DPA8MWL7 114 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 FAM25AB3EWG3 89 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 FAM25CB3EWG5 89 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 FAM25GB3EWG6 89 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 TIMM8AO60220 97 aaPredicted RBP12.09□□□□□ -0.47
VPS26A-209ENST00000497564 CA6P23280 308 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 TALDO1P37837 337 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 NR4A2P43354 598 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 FABP6P51161 128 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 MMP15P51511 669 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 KLF3P57682 345 aaPredicted RBP12.09□□□□□ -0.47
VPS26A-209ENST00000497564 GNG3P63215 75 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 DMRTC1Q5HYR2 192 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 GLIPR1L1Q6UWM5 242 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 BAIAP2L2Q6UXY1 529 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 CDH24Q86UP0 819 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 SAXO1Q8IYX7 474 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 CMTM4Q8IZR5 234 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 ZSCAN4Q8NAM6 433 aaPredicted RBP12.09□□□□□ -0.47
VPS26A-209ENST00000497564 PXT1Q8NFP0 134 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 OR4M1Q8NGD0 313 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 TNFAIP8L1Q8WVP5 186 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 BORCS5Q969J3 196 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 PLPPR2Q96GM1 343 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 MICU1Q9BPX6 476 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 PALMDQ9NP74 551 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 TMEM100Q9NV29 134 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 EXTL2Q9UBQ6 330 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 RAB22AQ9UL26 194 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 ARFGEF3Q5TH69 2177 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 ITPR3Q14573 2671 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 TANC2Q9HCD6 1990 aa12.09□□□□□ -0.47
VPS26A-209ENST00000497564 ZNF469Q96JG9 3925 aaPredicted RBP12.08□□□□□ -0.47
VPS26A-209ENST00000497564 A0A0A6YYH2 397 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms