RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 RDH5Q92781 318 aa16.71■□□□□ 0.27
SCAMP3-209ENST00000497470 RPL3LQ92901 407 aaKnown RBP16.71■□□□□ 0.27
SCAMP3-209ENST00000497470 SORCS2Q96PQ0 1159 aa16.71■□□□□ 0.27
SCAMP3-209ENST00000497470 VRK1Q99986 396 aaPredicted RBP16.71■□□□□ 0.27
SCAMP3-209ENST00000497470 FGF23Q9GZV9 251 aaPredicted RBP16.71■□□□□ 0.27
SCAMP3-209ENST00000497470 TPK1Q9H3S4 243 aa16.71■□□□□ 0.27
SCAMP3-209ENST00000497470 GCM1Q9NP62 436 aa16.71■□□□□ 0.27
SCAMP3-209ENST00000497470 PCDHB16Q9NRJ7 776 aa16.71■□□□□ 0.27
SCAMP3-209ENST00000497470 CEPT1Q9Y6K0 416 aa16.71■□□□□ 0.27
SCAMP3-209ENST00000497470 A0A1W2PPK0 400 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 NOL3O60936 208 aaKnown RBP16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 HCKP08631 526 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 ADRA2CP18825 462 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 RAB3BP20337 219 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 DNASE1P24855 282 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 BMXP51813 675 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 SCAND1P57086 179 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 DDI2Q5TDH0 399 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 CRIP3Q6Q6R5 217 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 USP43Q70EL4 1123 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 CLVS1Q8IUQ0 354 aaPredicted RBP16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 MKXQ8IYA7 352 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 Q8IYB0 196 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 C1orf87Q8N0U7 546 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 ITLN1Q8WWA0 313 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 AQP3Q92482 292 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 GTF3AQ92664 365 aaKnown RBP16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 SEBOXQ9HB31 216 aaPredicted RBP16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 V9GY05 133 aa16.7■□□□□ 0.26
SCAMP3-209ENST00000497470 LRRC30A6NM36 301 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 ZNF780AO75290 641 aaPredicted RBP16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 CYB5AP00167 134 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 CSF3P09919 207 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 UBBP0CG47 229 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 ZP1P60852 638 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 CCL8P80075 99 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 PDZK1IP1Q13113 114 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 DYNC1I2Q13409 638 aaKnown RBP16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 GPR176Q14439 515 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 FAM166AQ6J272 317 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 WDR86Q86TI4 376 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 FAM90A1Q86YD7 464 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 C11orf53Q8IXP5 236 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 SCCPDHQ8NBX0 429 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 OR52N4Q8NGI2 321 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 OR6M1Q8NGM8 313 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 OR11L1Q8NGX0 322 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 DGCR14Q96DF8 476 aaKnown RBP16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 LURAP1Q96LR2 239 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 FAM192AQ9GZU8 254 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 PPP1R3EQ9H7J1 279 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 RASL12Q9NYN1 266 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 IL36GQ9NZH8 169 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 PPP1R3CQ9UQK1 317 aa16.69■□□□□ 0.26
SCAMP3-209ENST00000497470 IGKV1-27A0A075B6S5 117 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 IGHV1-69-2A0A0G2JMI3 117 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 NOTOA8MTQ0 251 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 SLC17A2O00624 439 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 LHBP01229 141 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 MAS1P04201 325 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 CPT2P23786 658 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 PTGFRP43088 359 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 HAAOP46952 286 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 TMEM33P57088 247 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 DSCR9P59020 149 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 KRTAP10-9P60411 292 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 ISOC1Q96CN7 298 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 FBLN5Q9UBX5 448 aa16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 HRNRQ86YZ3 2850 aaPredicted RBP16.68■□□□□ 0.26
SCAMP3-209ENST00000497470 FAM230AA0A1W2PPH8 454 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 SHISA3A0PJX4 238 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 NCR1O76036 304 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 SDC2P34741 201 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 HFEQ30201 348 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 ELP2Q6IA86 826 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 PRSS57Q6UWY2 283 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 WDR82Q6UXN9 313 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 ZCCHC24Q8N2G6 241 aaKnown RBP16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 ORAI1Q96D31 301 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 MRPS24Q96EL2 167 aaKnown RBP16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 RNF7Q9UBF6 113 aa16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 RSL24D1Q9UHA3 163 aaKnown RBP16.67■□□□□ 0.26
SCAMP3-209ENST00000497470 A6NHS1 94 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 IFITM5A6NNB3 132 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 SRRM5B3KS81 715 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 AIPO00170 330 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 NDUFS8O00217 210 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 TPD52L2O43399 206 aaKnown RBP16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 HPXP02790 462 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 PGA5P0DJD9 388 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 PTH2RP49190 550 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 ERVK11-1P61568 191 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 DEFB113Q30KQ7 82 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 HIST2H2BCQ6DN03 193 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 HAGHLQ6PII5 290 aaPredicted RBP16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 CALHM1Q8IU99 346 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 POC1AQ8NBT0 407 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 TRMT10AQ8TBZ6 339 aaKnown RBP16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 TBC1D15Q8TC07 691 aa16.66■□□□□ 0.26
SCAMP3-209ENST00000497470 KCTD12Q96CX2 325 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms