RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 LRRC3CA6NJW4 275 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ADM5C9JUS6 153 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 OVOL3O00110 214 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 UPK1AO00322 258 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC1A7O00341 560 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 HSD17B6O14756 317 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 NKX2-8O15522 239 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 TMPRSS11DO60235 418 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 CNMDO75829 334 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 CLDN7O95471 211 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 SYNGR4O95473 234 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 SIX6O95475 246 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 SEMA4FO95754 770 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 HLA-HP01893 362 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 KLK1P06870 262 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 FABP4P15090 132 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GCSHP23434 173 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 NMBRP28336 390 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GPR1P46091 355 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 IER3P46695 156 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 FUT6P51993 359 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 FOXG1P55316 489 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 RAB38P57729 211 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 RPL8P62917 257 aaKnown RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 TLE3Q04726 772 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 KLRC3Q07444 240 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 MFGE8Q08431 387 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 KIR2DS1Q14954 304 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 BATFQ16520 125 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 LY6KQ17RY6 165 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 CTU2Q2VPK5 515 aaKnown RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 HLA-BQ31612 363 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 MS4A18Q3C1V0 323 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 CLEC12AQ5QGZ9 265 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GGNBP1Q5YKI7 109 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 STUMQ69YW2 141 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 BTNL8Q6UX41 500 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 TOMM20LQ6UXN7 152 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GTF2H5Q6ZYL4 71 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 OAFQ86UD1 273 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 HAPLN4Q86UW8 402 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 IZUMO1Q8IYV9 350 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF567Q8N184 647 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 LRRC25Q8N386 305 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC35G3Q8N808 338 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 RNF149Q8NC42 400 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 LINC00301Q8NCQ3 95 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 NPEPL1Q8NDH3 523 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 DUSP18Q8NEJ0 188 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4F6Q8NGB9 312 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 SFXN5Q8TD22 340 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 NTN5Q8WTR8 489 aaPredicted RBP2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 ART4Q93070 314 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 RPEQ96AT9 228 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 FGGYQ96C11 551 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 DUX3Q96PT4 197 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 PKMYT1Q99640 499 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 MACROD1Q9BQ69 325 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 FAIM2Q9BWQ8 316 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 GTSF1LQ9H1H1 148 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 INPP5EQ9NRR6 644 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 RNF115Q9Y4L5 304 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 WSB1Q9Y6I7 421 aa2.7□□□□□ -1.98
SNRNP48-202ENST00000496946 MYH10P35580 1976 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TOPBP1Q92547 1522 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A087WX48 190 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TINCRA0A1B0GVN0 87 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1W2PRE2 83 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1W2PRF3 423 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1W2PRM7 423 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM189A5PLL7 270 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM90A10PA6NDY2 464 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR5B21A6NL26 309 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 IFITM5A6NNB3 132 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF705GA8MUZ8 300 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 NPIPB11E5RHQ5 1161 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC16A7O60669 478 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 CTSLP07711 333 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 PRPH2P23942 346 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 IMPA1P29218 277 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 AGTR1P30556 359 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 POLR2IP36954 125 aaKnown RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 CRYBB2P43320 205 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 GPR6P46095 362 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 BDKRB1P46663 353 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TFPI2P48307 235 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SULT1A1P50225 295 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SULT1A2P50226 295 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 RAB10P61026 200 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 SIRPAP78324 504 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 PITX1P78337 314 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 HOXC5Q00444 222 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 IAH1Q2TAA2 248 aaPredicted RBP2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM97Q5BJF2 176 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 AADACL2Q6P093 401 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 AGTRAPQ6RW13 159 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 MRGPRGQ86SM5 289 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 LRRTM1Q86UE6 522 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 BMPERQ8N8U9 685 aa2.69□□□□□ -1.98
SNRNP48-202ENST00000496946 OR6T1Q8NGN1 323 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms