RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 IGHV2OR16-5A0A0B4J2B6 119 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 IGKV1-6A0A0C4DH72 117 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 GOLGA8JA6NMD2 632 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 CENPBD1B2RD01 187 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 H0YC42 278 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 TRAPPC6AO75865 159 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 IGKV1-39P01597 117 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 IGKV1D-39P04432 117 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 SLC35G6P0C7Q6 338 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 GOLGA8HP0CJ92 632 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 PAX6P26367 422 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 GALR1P47211 349 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 MLF1P58340 268 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 C16orf47Q6ZP98 133 aaPredicted RBP2.41□□□□□ -2.02
TARDBP-210ENST00000496840 OR10Z1Q8NGY1 313 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 SFXN5Q8TD22 340 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 GPR82Q96P67 336 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 NAPGQ99747 312 aaPredicted RBP2.41□□□□□ -2.02
TARDBP-210ENST00000496840 RHOXF2Q9BQY4 288 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 ZNF649Q9BS31 505 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 LHX5Q9H2C1 402 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 SND1-IT1Q9HBX3 110 aa2.41□□□□□ -2.02
TARDBP-210ENST00000496840 A0A0J9YYE9 177 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 ZNF98A6NK75 572 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 CEACAM18A8MTB9 384 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 J3QT63 122 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 OR7C2O60412 319 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 TRBC1P01850 177 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 LGALS3P17931 250 aaKnown RBP2.4□□□□□ -2.03
TARDBP-210ENST00000496840 PRSS3P35030 304 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 GDI2P50395 445 aaKnown RBP2.4□□□□□ -2.03
TARDBP-210ENST00000496840 SLC35B1P78383 322 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 ST3GAL4Q11206 333 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 IL15RAQ13261 267 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 FAM53BQ14153 422 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 WDR43Q15061 677 aaKnown RBP eCLIP2.4□□□□□ -2.03
TARDBP-210ENST00000496840 MED27Q6P2C8 311 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 PRSS54Q6PEW0 395 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 SPINT4Q6UDR6 99 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 SLC7A5P1Q8MH63 180 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 ARHGAP18Q8N392 663 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 CYB561A3Q8NBI2 242 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 OR2M7Q8NG81 312 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 OR52K1Q8NGK4 314 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 OR5M1Q8NGP8 315 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 OR52N1Q8NH53 320 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 OR1S1Q8NH92 325 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 TVP23CQ96ET8 276 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 C20orf144Q9BQM9 153 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 STMN4Q9H169 189 aaPredicted RBP2.4□□□□□ -2.03
TARDBP-210ENST00000496840 DHCR7Q9UBM7 475 aaKnown RBP2.4□□□□□ -2.03
TARDBP-210ENST00000496840 MMACHCQ9Y4U1 282 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 SCN4AP35499 1836 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 TRIP11Q15643 1979 aa2.4□□□□□ -2.03
TARDBP-210ENST00000496840 BAZ2AQ9UIF9 1905 aaKnown RBP2.39□□□□□ -2.03
TARDBP-210ENST00000496840 LOC102724200A0A096LPH7 203 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-210ENST00000496840 TRAV8-4A0A0B4J246 113 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 TRAV8-6A0A0B4J262 113 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 MYL12BO14950 172 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 P01737 135 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 MMP7P09237 267 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-210ENST00000496840 STAG3L2P0CL84 134 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 ERFP50548 548 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 MTPNP58546 118 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 PPP1CAP62136 330 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 PSMC5P62195 406 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 RBX1P62877 108 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 RPL31P62899 125 aaKnown RBP2.39□□□□□ -2.03
TARDBP-210ENST00000496840 MAD2L1BPQ15013 274 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-210ENST00000496840 ATP6V1FQ16864 119 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 NDUFAF6Q330K2 333 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 ORMDL3Q8N138 153 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 OR6K6Q8NGW6 343 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 OR1P1Q8NH06 330 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 OR51A7Q8NH64 312 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 CACNG8Q8WXS5 425 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 SNF8Q96H20 258 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 Q96MT0 163 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 FRMD8P1Q9BZ68 369 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-210ENST00000496840 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
TARDBP-210ENST00000496840 LOXHD1Q8IVV2 1947 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 JCADQ9P266 1359 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 KIAA1671Q9BY89 1806 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 TMEM72A0PK05 275 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.38□□□□□ -2.03
TARDBP-210ENST00000496840 SEC16AO15027 2179 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 CSTAP01040 98 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 IDH2P48735 452 aaKnown RBP2.38□□□□□ -2.03
TARDBP-210ENST00000496840 ATP5J2P56134 94 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 GRB2P62993 217 aaKnown RBP2.38□□□□□ -2.03
TARDBP-210ENST00000496840 C2orf54Q08AI8 447 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 HNRNPA1L2Q32P51 320 aaKnown RBP2.38□□□□□ -2.03
TARDBP-210ENST00000496840 LINC00303Q3SY05 128 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 ZNF678Q5SXM1 525 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 TBPL2Q6SJ96 375 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 BBS7Q8IWZ6 715 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 ING5Q8WYH8 240 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 FAM131CQ96AQ9 280 aa2.38□□□□□ -2.03
TARDBP-210ENST00000496840 CENPNQ96H22 339 aaPredicted RBP2.38□□□□□ -2.03
TARDBP-210ENST00000496840 MAP1LC3CQ9BXW4 147 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms