RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 NUBPLQ8TB37 319 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PPP1R14AQ96A00 147 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PGAM5Q96HS1 289 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 WFIKKN1Q96NZ8 548 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 DDOQ99489 341 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF436Q9C0F3 470 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 DNAJC4Q9NNZ3 241 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 FGF20Q9NP95 211 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 MRPS18AQ9NVS2 196 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 C14orf119Q9NWQ9 140 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 NDUFB11Q9NX14 153 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 KLHDC2Q9Y2U9 406 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CHCHD2Q9Y6H1 151 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 APC2O95996 2303 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SVILO95425 2214 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 EML6Q6ZMW3 1958 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 IGKV1D-43A0A0B4J1Z2 117 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 NKX6-3A6NJ46 265 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 MT-ND5P03915 603 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 HIST1H2ABP04908 130 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CD5P06127 495 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CD14P08571 375 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 MAS1LP35410 378 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ARR3P36575 388 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 DNASE1L1P49184 302 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 RPL19P84098 196 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 RIPPLY1Q0D2K3 151 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 RSU1Q15404 277 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF404Q494X3 552 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 GPR157Q5UAW9 335 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM91Q6ZNR0 172 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 HIST3H2AQ7L7L0 130 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SSX7Q7RTT5 188 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 DPY19L4Q7Z388 723 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 HSD17B13Q7Z5P4 300 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PEG10Q86TG7 708 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ANGPTL5Q86XS5 388 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 LDLRAD3Q86YD5 345 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 PUSL1Q8N0Z8 303 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 UBAC2Q8NBM4 344 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 OR10W1Q8NGF6 305 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 OR10K1Q8NGX5 313 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 CT55Q8WUE5 264 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 MITD1Q8WV92 249 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ASB15Q8WXK1 588 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ACOT12Q8WYK0 555 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 RAB1CQ92928 201 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 HIST1H2ACQ93077 130 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 AMELYQ99218 206 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 UTP23Q9BRU9 249 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ALG12Q9BV10 488 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 SRRQ9GZT4 340 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 EXOSC3Q9NQT5 275 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 GPR173Q9NS66 373 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 RCC2Q9P258 522 aaKnown RBP5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ING4Q9UNL4 249 aa5.44□□□□□ -1.54
SSBP1-213ENST00000496622 ACACAQ13085 2346 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 TRAV26-1A0A087WT03 109 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 IGHV3-15A0A0B4J1V0 119 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM129A0AVI4 362 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 OR6C76A6NM76 312 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 F5H0A9 414 aaPredicted RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 M0R143 59 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 NPIPB7O75200 414 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 GLCEO94923 617 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 WNT11O96014 354 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 MT-ATP6P00846 226 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 IGHV2-5P01817 119 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 HLA-DQA2P01906 255 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PMP2P02689 132 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 BGLAPP02818 100 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF44P15621 663 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 CTLA4P16410 223 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 CPEP16870 476 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 AZGP1P25311 298 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PMELP40967 661 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 FOLR3P41439 243 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PPT1P50897 306 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 OR10A3P58181 314 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 RAP1BP61224 184 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 GUK1Q16774 197 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 LINC01590Q5TEZ4 76 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 SPINK14Q6IE38 97 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 GRINAQ7Z429 371 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 ABHD12BQ7Z5M8 362 aaPredicted RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PPP1R32Q7Z5V6 425 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 RPS19BP1Q86WX3 136 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 LAX1Q8IWV1 398 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 SKA3Q8IX90 412 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF440Q8IYI8 595 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 OR5L2Q8NGL0 311 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM45BQ96B21 275 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 HES7Q9BYE0 225 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PPP1R3EQ9H7J1 279 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 CNTD2Q9H8S5 307 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 TMEM9BQ9NQ34 198 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 UPB1Q9UBR1 384 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 PPIEQ9UNP9 301 aaKnown RBP5.43□□□□□ -1.54
SSBP1-213ENST00000496622 DNAJC13O75165 2243 aa5.43□□□□□ -1.54
SSBP1-213ENST00000496622 ZNF407Q9C0G0 2248 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms