RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	PHF1	O43189	567 aa	Predicted RBP	10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	SYT7	O43581	403 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	WBP4	O75554	376 aa	Known RBP	10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	ZNF19	P17023	458 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	CD80	P33681	288 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	OR12D2	P58182	307 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	CSNK2B	P67870	215 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	PAX2	Q02962	417 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	CEP78	Q5JTW2	689 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	TMEM244	Q5VVB8	128 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	CD276	Q5ZPR3	534 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	PLCXD3	Q63HM9	321 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	FAM90A1	Q86YD7	464 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	ZNF573	Q86YE8	665 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	C19orf18	Q8NEA5	215 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	OR2G2	Q8NGZ5	317 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	ZNF671	Q8TAW3	534 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	NANP	Q8TBE9	248 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	CYGB	Q8WWM9	190 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	RPL3L	Q92901	407 aa	Known RBP	10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	TECTB	Q96PL2	329 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	JAM3	Q9BX67	310 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	FGF23	Q9GZV9	251 aa	Predicted RBP	10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	VCX	Q9H320	206 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	AMBN	Q9NP70	447 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	FGF20	Q9NP95	211 aa	Predicted RBP	10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	MMP26	Q9NRE1	261 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	ERVK13-1	Q9NX77	482 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	FRRS1L	Q9P0K9	344 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	MYRF	Q9Y2G1	1151 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	INSIG2	Q9Y5U4	225 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	MALRD1	Q5VYJ5	2156 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	ABCA2	Q9BZC7	2435 aa		10.31	□□□□□ -0.76
MRPL55-233	ENST00000495899	KIR2DS1	A0A191URI9	304 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	ADAM20	O43506	726 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	SERPINA3	P01011	423 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	HTR1A	P08908	422 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	PPIAL4G	P0DN37	164 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	EGR1	P18146	543 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	DCK	P27707	260 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	KIR3DL2	P43630	455 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	SLC34A1	Q06495	639 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	PAX8	Q06710	450 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	WDR25	Q64LD2	544 aa	Predicted RBP	10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	BTNL3	Q6UXE8	466 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	C1QL2	Q7Z5L3	287 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	LHFPL3	Q86UP9	236 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	OR52I1	Q8NGK6	324 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	RAB40A	Q8WXH6	277 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	AQP3	Q92482	292 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	PELI1	Q96FA3	418 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	C4orf36	Q96KX1	117 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	ZNF649	Q9BS31	505 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	MRI1	Q9BV20	369 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	ALG8	Q9BVK2	526 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	DNTTIP1	Q9H147	329 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	PLEKHA1	Q9HB21	404 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	RASL12	Q9NYN1	266 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	OPN4	Q9UHM6	478 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	AUP1	Q9Y679	476 aa		10.3	□□□□□ -0.76
MRPL55-233	ENST00000495899	ANK3	Q12955	4377 aa	Known RBP	10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	LOC105371242	A0A075B767	164 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	IGHV2-70D	A0A0C4DH43	119 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	PQLC2L	A1A4F0	135 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	ANKRD61	A6NGH8	418 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	CLIC3	O95833	236 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	GYPA	P02724	150 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	LIPF	P07098	398 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	ACAA1	P09110	424 aa	Predicted RBP	10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	CAPG	P40121	348 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	NANOS3	P60323	173 aa	Known RBP	10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	HOXA4	Q00056	320 aa	Predicted RBP	10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	ODF4	Q2M2E3	257 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	SLC36A1	Q7Z2H8	476 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	PP6455	Q8WZ26	134 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	DACT3	Q96B18	629 aa	Predicted RBP	10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	SLC7A11	Q9UPY5	501 aa		10.29	□□□□□ -0.76
MRPL55-233	ENST00000495899	IGHV3OR15-7	A0A075B7D8	119 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899		A0A0A6YYJ9	748 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	LOC107986453	A0A1B0GWG9	222 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	OR4C45	A6NMZ5	311 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	ADARB2-AS1	A8MUL3	147 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899		H0YJX3	145 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	EREG	O14944	169 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	TMPRSS2	O15393	492 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	AKR7A2	O43488	359 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	ENSA	O43768	121 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	NOS1AP	O75052	506 aa	Predicted RBP	10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	RHBDL1	O75783	438 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	GATB	O75879	557 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	ECD	O95905	644 aa	Predicted RBP	10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	FSHB	P01225	129 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	LIMS3	P0CW19	117 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	LIMS4	P0CW20	117 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	TGM4	P49221	684 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	FUT6	P51993	359 aa		10.28	□□□□□ -0.76
MRPL55-233	ENST00000495899	GBX2	P52951	348 aa	Predicted RBP	10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms