RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 HAAOP46952 286 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 RBP2P50120 134 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 BTG1P62324 171 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 PPP3R1P63098 170 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 KCNJ8Q15842 424 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 DMRTC1Q5HYR2 192 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 AVPI1Q5T686 147 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 HAGHLQ6PII5 290 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-235ENST00000495515 WDR82Q6UXN9 313 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 ZNF826PQ6ZT77 177 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 LHFPL2Q6ZUX7 228 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 OR10Z1Q8NGY1 313 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 NPRL2Q8WTW4 380 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 LRRC29Q8WV35 223 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 RPL3LQ92901 407 aaKnown RBP14.4□□□□□ -0.1
HDAC6-235ENST00000495515 OPALINQ96PE5 141 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 TMED9Q9BVK6 235 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 FGF23Q9GZV9 251 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-235ENST00000495515 VCX3AQ9NNX9 186 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 DCAF16Q9NXF7 216 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 PPIAL4AQ9Y536 164 aa14.4□□□□□ -0.1
HDAC6-235ENST00000495515 A0A087WXM4 84 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 ZNF879B4DU55 563 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 J3QT63 122 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 FOSL1P15407 271 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 MTCP1P56278 107 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 RPS11P62280 158 aaKnown RBP eCLIP14.39□□□□□ -0.11
HDAC6-235ENST00000495515 DOC2BQ14184 412 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 TMEM155Q4W5P6 130 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 ARMCX4Q5H9R4 360 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 UBE2UQ5VVX9 321 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 C11orf53Q8IXP5 236 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 SPICQ8N5J4 248 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 BOLLQ8N9W6 283 aaKnown RBP14.39□□□□□ -0.11
HDAC6-235ENST00000495515 TSPAN14Q8NG11 270 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 OR13C5Q8NGS8 318 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 C18orf12Q96KH6 178 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 OR14A2Q96R54 314 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 NR1H4Q96RI1 486 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-235ENST00000495515 GAL3ST1Q99999 423 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 ZNF696Q9H7X3 374 aa14.39□□□□□ -0.11
HDAC6-235ENST00000495515 IGHV4-61A0A0C4DH41 118 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 IGKV1-9A0A0C4DH69 117 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 CYB5AP00167 134 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 IGHV2-70P01814 119 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 HCKP08631 526 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 PCMT1P22061 227 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 PSMB9P28065 219 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 ACSM3Q53FZ2 586 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 LRRC28Q86X40 367 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-235ENST00000495515 PHC2Q8IXK0 858 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 AQP3Q92482 292 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 COX4I2Q96KJ9 171 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 TMUB1Q9BVT8 246 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 PKIBQ9C010 78 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 TAS2R4Q9NYW5 299 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 PCDHB10Q9UN67 800 aa14.38□□□□□ -0.11
HDAC6-235ENST00000495515 TRBV5-7A0A0A0MS05 114 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 TRAV38-1A0A0B4J264 116 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 LGALS8O00214 317 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 SMAD7O15105 426 aaKnown RBP14.37□□□□□ -0.11
HDAC6-235ENST00000495515 LHBP01229 141 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 CPT2P23786 658 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 GABRA5P31644 462 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 TGFBR2P37173 567 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 ZMYND11Q15326 602 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 GCSAMQ8N6F7 178 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 PHYHIPQ92561 330 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 RAB39BQ96DA2 213 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 DERL3Q96Q80 235 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 NARFLQ9H6Q4 476 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 TMEM138Q9NPI0 162 aa14.37□□□□□ -0.11
HDAC6-235ENST00000495515 A0A096LNT2 108 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 OOEPA6NGQ2 149 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 SRRM5B3KS81 715 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 NDUFA2O43678 99 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 GPX5O75715 221 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 INHBBP09529 407 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 MUC1P15941 1255 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-235ENST00000495515 FSTP19883 344 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 MPZP25189 248 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 IL24Q13007 206 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 MICBQ29980 383 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 ZNF529Q6P280 563 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 ANGPTL5Q86XS5 388 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 MKXQ8IYA7 352 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 CLDND2Q8NHS1 167 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 TMEM203Q969S6 136 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 METTL17Q9H7H0 456 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-235ENST00000495515 TMEM165Q9HC07 324 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 RASL12Q9NYN1 266 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 DNAJB11Q9UBS4 358 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 FOXJ3Q9UPW0 622 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 ITPR3Q14573 2671 aa14.36□□□□□ -0.11
HDAC6-235ENST00000495515 CCRL2O00421 344 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 AKR7A2O43488 359 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 RHBDL1O75783 438 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 RGS9O75916 674 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-235ENST00000495515 ZNF205O95201 554 aa14.35□□□□□ -0.11
HDAC6-235ENST00000495515 ALDOBP05062 364 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms