RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	FGF16	O43320	207 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ERI3	O43414	337 aa	Known RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ICOSLG	O75144	302 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ENTPD6	O75354	484 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	NKX2-2	O95096	273 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	RAB36	O95755	333 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	FABP3	P05413	133 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ANKRD34C	P0C6C1	535 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	SLC2A2	P11168	524 aa	Predicted RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	UGT2B7	P16662	529 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ALOX5AP	P20292	161 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	RPS12	P25398	132 aa	Known RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	RPL4	P36578	427 aa	Known RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	IER3	P46695	156 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	PAX9	P55771	341 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	RAB10	P61026	200 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	EIF5A	P63241	154 aa	Known RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	CAV1	Q03135	178 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	PRKCD	Q05655	676 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	TCP10	Q12799	353 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	NME3	Q13232	169 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	CEACAM7	Q14002	265 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	RHEB	Q15382	184 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	OR1Q1	Q15612	314 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	SYPL1	Q16563	259 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	MS4A18	Q3C1V0	323 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	DCAF4L1	Q3SXM0	396 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	KIAA1644	Q3SXP7	199 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	MEST	Q5EB52	335 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	TMEM69	Q5SWH9	247 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	CST9	Q5W186	159 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	LCN10	Q6JVE6	187 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	TEX38	Q6PEX7	206 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ENPP7	Q6UWV6	458 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	CASP12	Q6UXS9	341 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	FRRS1	Q6ZNA5	592 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	GLT6D1	Q7Z4J2	308 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ZNF595	Q8IYB9	648 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	CBR4	Q8N4T8	237 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ARIH2OS	Q8N7S6	290 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ACOT4	Q8N9L9	421 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	OR4A4P	Q8NGN8	299 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	OR6K2	Q8NGY2	324 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	LYPD6B	Q8NI32	183 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	SPPL2B	Q8TCT7	592 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ZNF431	Q8TF32	576 aa	Predicted RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	FAM3C	Q92520	227 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	AURKB	Q96GD4	344 aa	Predicted RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	GINS4	Q9BRT9	223 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	TRIM51	Q9BSJ1	452 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ZNF385D	Q9H6B1	395 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	MAGIX	Q9H6Y5	334 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	HEXA-AS1	Q9H8Q6	139 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	FGF22	Q9HCT0	170 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ECHDC1	Q9NTX5	307 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	DUS2	Q9NX74	493 aa	Known RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	FBXL12	Q9NXK8	326 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	THAP10	Q9P2Z0	257 aa	Predicted RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ZNF346	Q9UL40	294 aa	Known RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	ST3GAL6	Q9Y274	331 aa		3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	AK6	Q9Y3D8	172 aa	Known RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	RPRD2	Q5VT52	1461 aa	Known RBP	3.91	□□□□□ -1.78
CCDC66-222	ENST00000494672	CAMTA1	Q9Y6Y1	1673 aa		3.9	□□□□□ -1.78
CCDC66-222	ENST00000494672	MET	P08581	1390 aa		3.9	□□□□□ -1.78
CCDC66-222	ENST00000494672	CACNA1S	Q13698	1873 aa		3.9	□□□□□ -1.78
CCDC66-222	ENST00000494672	TRO	Q12816	1431 aa	Predicted RBP	3.9	□□□□□ -1.78
CCDC66-222	ENST00000494672	TNS3	Q68CZ2	1445 aa		3.9	□□□□□ -1.78
CCDC66-222	ENST00000494672		A0A1W2PRF3	423 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672		A0A1W2PRM7	423 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	C1orf226	A1L170	272 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	SLC22A20	A6NK97	555 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	C15orf62	A8K5M9	175 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	TRIM49D1	C9J1S8	452 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	C15orf65	H3BRN8	121 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	TMEM178B	H3BS89	294 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	RPL36A-HNRNPH2	H7BZ11	118 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MANBA	O00462	879 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	TNFSF11	O14788	317 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	P2RX6	O15547	441 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	SYT7	O43581	403 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MFSD11	O43934	449 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	FOXH1	O75593	365 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	CDS2	O95674	445 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	HPRT1	P00492	218 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	TSHB	P01222	138 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MT-ND4L	P03901	98 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	IFNW1	P05000	195 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	ALDOB	P05062	364 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	APOD	P05090	189 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	UBB	P0CG47	229 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MPC1L	P0DKB6	136 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	OR13C7	P0DN81	318 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	IGHV4-38-2	P0DP08	117 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	HIST1H1T	P22492	207 aa	Predicted RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	MDH2	P40926	338 aa	Known RBP	3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	GPR1	P46091	355 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	XCR1	P46094	333 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	CCL11	P51671	97 aa		3.9	□□□□□ -1.79
CCDC66-222	ENST00000494672	ATP1B3	P54709	279 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms