RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 GLRA1P23415 457 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 OR12D2P58182 307 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 FGF12P61328 243 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 IKZF1Q13422 519 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 LPCAT4Q643R3 524 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 BTN2A1Q7KYR7 527 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 SLC36A1Q7Z2H8 476 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 RDH10Q8IZV5 341 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 FGFRL1Q8N441 504 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 FAM216BQ8N7L0 139 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 ZNF671Q8TAW3 534 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 SUCNR1Q9BXA5 334 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 ZNF69Q9UC07 566 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 WNK2Q9Y3S1 2297 aa18.18■□□□□ 0.5
HPS3-207ENST00000494327 J3QLW9 94 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 SLC16A6O15403 523 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 FCN3O75636 299 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 ZNF19P17023 458 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 CCL1P22362 96 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 KIR3DL2P43630 455 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 ISL1P61371 349 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 CDONQ4KMG0 1287 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 TMEM42Q69YG0 159 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 KCTD20Q7Z5Y7 419 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 LHFPL3Q86UP9 236 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 AQP3Q92482 292 aa18.17■□□□□ 0.5
HPS3-207ENST00000494327 C12orf43Q96C57 262 aaKnown RBP18.17■□□□□ 0.5
HPS3-207ENST00000494327 NDUFB3O43676 98 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 IGHV4-38-2P0DP08 117 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 AMY2BP19961 511 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 HAAOP46952 286 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 STUMQ69YW2 141 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 Q6ZSR3 168 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 ZNF573Q86YE8 665 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 BCL6BQ8N143 479 aaPredicted RBP18.16■□□□□ 0.5
HPS3-207ENST00000494327 OR2G2Q8NGZ5 317 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 TRMT10AQ8TBZ6 339 aaKnown RBP18.16■□□□□ 0.5
HPS3-207ENST00000494327 NPRL2Q8WTW4 380 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 TMIGD2Q96BF3 282 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 UPRTQ96BW1 309 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 C4orf36Q96KX1 117 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 PCGF1Q9BSM1 259 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 MS4A7Q9GZW8 240 aaPredicted RBP18.16■□□□□ 0.5
HPS3-207ENST00000494327 NLKQ9UBE8 527 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 MYRFQ9Y2G1 1151 aa18.16■□□□□ 0.5
HPS3-207ENST00000494327 TRAV40A0A0B4J280 105 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 LOC107986453A0A1B0GWG9 222 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 FAM230AA0A1W2PPH8 454 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 ANKRD61A6NGH8 418 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 NKX6-3A6NJ46 265 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 DHRS7CA6NNS2 312 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 ATP6V1G2O95670 118 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 HTR1AP08908 422 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 PPIAL4GP0DN37 164 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 SELLP14151 372 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 GABRA2P47869 451 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 HILS1P60008 231 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 USP43Q70EL4 1123 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 PNLDC1Q8NA58 520 aaKnown RBP18.15■□□□□ 0.5
HPS3-207ENST00000494327 CYGBQ8WWM9 190 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 RNF166Q96A37 237 aaPredicted RBP18.15■□□□□ 0.5
HPS3-207ENST00000494327 MRPL48Q96GC5 212 aaKnown RBP18.15■□□□□ 0.5
HPS3-207ENST00000494327 ZNF488Q96MN9 340 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 RDH12Q96NR8 316 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 FRRS1LQ9P0K9 344 aa18.15■□□□□ 0.5
HPS3-207ENST00000494327 PQLC2LA1A4F0 135 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 OR2AT4A6NND4 320 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 ZNF879B4DU55 563 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 SYNGR1O43759 233 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 CLIC3O95833 236 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 FADS2O95864 444 aaKnown RBP18.14■□□□□ 0.49
HPS3-207ENST00000494327 ECDO95905 644 aaPredicted RBP18.14■□□□□ 0.49
HPS3-207ENST00000494327 LIPFP07098 398 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 UBCP0CG48 685 aaKnown RBP18.14■□□□□ 0.49
HPS3-207ENST00000494327 TGM4P49221 684 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 ACTA2P62736 377 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 ACTG2P63267 376 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 SLC34A1Q06495 639 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 LRRC10Q5BKY1 277 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 ATPAF1Q5TC12 328 aaPredicted RBP18.14■□□□□ 0.49
HPS3-207ENST00000494327 RBMS3Q6XE24 437 aaKnown RBP18.14■□□□□ 0.49
HPS3-207ENST00000494327 BATF2Q8N1L9 274 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 APH1BQ8WW43 257 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 JMJD8Q96S16 334 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 ALG8Q9BVK2 526 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 NKX1-2Q9UD57 310 aaPredicted RBP18.14■□□□□ 0.49
HPS3-207ENST00000494327 SLC7A11Q9UPY5 501 aa18.14■□□□□ 0.49
HPS3-207ENST00000494327 RPL36Q9Y3U8 105 aaKnown RBP18.14■□□□□ 0.49
HPS3-207ENST00000494327 TOX4O94842 621 aa18.13■□□□□ 0.49
HPS3-207ENST00000494327 SFTPBP07988 381 aa18.13■□□□□ 0.49
HPS3-207ENST00000494327 PEX2P28328 305 aa18.13■□□□□ 0.49
HPS3-207ENST00000494327 NANOS3P60323 173 aaKnown RBP18.13■□□□□ 0.49
HPS3-207ENST00000494327 ARF6P62330 175 aa18.13■□□□□ 0.49
HPS3-207ENST00000494327 GALEQ14376 348 aa18.13■□□□□ 0.49
HPS3-207ENST00000494327 UBE2V2Q15819 145 aa18.13■□□□□ 0.49
HPS3-207ENST00000494327 SMN1Q16637 294 aaKnown RBP18.13■□□□□ 0.49
HPS3-207ENST00000494327 TMEM244Q5VVB8 128 aa18.13■□□□□ 0.49
HPS3-207ENST00000494327 ANGPTL5Q86XS5 388 aa18.13■□□□□ 0.49
HPS3-207ENST00000494327 SIGLECL1Q8N7X8 197 aa18.13■□□□□ 0.49
HPS3-207ENST00000494327 CCDC54Q8NEL0 328 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms