RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 CWH43Q9H720 699 aa3.64□□□□□ -1.83
HMGB3P14-201ENST00000494195 TREX1Q9NSU2 369 aa3.64□□□□□ -1.83
HMGB3P14-201ENST00000494195 SLC17A7Q9P2U7 560 aa3.64□□□□□ -1.83
HMGB3P14-201ENST00000494195 STOML2Q9UJZ1 356 aa3.64□□□□□ -1.83
HMGB3P14-201ENST00000494195 ASB3Q9Y575 518 aa3.64□□□□□ -1.83
HMGB3P14-201ENST00000494195 ANK1P16157 1881 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 COL27A1Q8IZC6 1860 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 LOC285095A0A1B0GVY8 99 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 GOLGA8RI6L899 631 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 PPP1R2P9O14990 202 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 CCNKO75909 580 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 HLA-DQB2P05538 268 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 OR4Q2P0C623 313 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 CCL5P13501 91 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 NQO1P15559 274 aaKnown RBP3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 ATF6P18850 670 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 BGNP21810 368 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 OR1E1P30953 314 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 NAA20P61599 178 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 NCALDP61601 193 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 CRADDP78560 199 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 STX3Q13277 289 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 PSMD5Q16401 504 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 METTL21CQ5VZV1 264 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 KDELC1Q6UW63 502 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 EID2Q8N6I1 236 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 PLPPR1Q8TBJ4 325 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 PDCD6IPQ8WUM4 868 aaKnown RBP3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 CCDC126Q96EE4 140 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 NEURL3Q96EH8 262 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 KLF6Q99612 283 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 DOK1Q99704 481 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 FOXC2Q99958 501 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 POPDC3Q9HBV1 291 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 CHRAC1Q9NRG0 131 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 C20orf96Q9NUD7 363 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 RBM22Q9NW64 420 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 SUN2Q9UH99 717 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 TMED5Q9Y3A6 229 aa3.63□□□□□ -1.83
HMGB3P14-201ENST00000494195 MCM3APO60318 1980 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 A0A0G2JND7 137 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 GOLGA8QA0A0J9YX86 632 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 GOLGA8OA6NCC3 632 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 GOLGA8NF8WBI6 632 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 PFDN6O15212 129 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 KDELR3O43731 214 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 KLHL2O95198 593 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 VAPBO95292 243 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 SERPINA6P08185 405 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 CT62P0C5K7 136 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 UBTFL6P0CB48 400 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 SLC35E2BP0CK96 405 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 MYL2P10916 166 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 RALBP11234 206 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 HMGA1P17096 107 aaKnown RBP3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 RAB3BP20337 219 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 OGNP20774 298 aaKnown RBP3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 CD9P21926 228 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 SSR4P51571 173 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 TPMTP51580 245 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 DNAJB13P59910 316 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 RAB10P61026 200 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 RPL26P61254 145 aaKnown RBP3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 AP1S1P61966 158 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 RPL23AP62750 156 aaKnown RBP3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 ACTG2P63267 376 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 ELF3P78545 371 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 GNA12Q03113 381 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 ZNF816Q0VGE8 651 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 BST1Q10588 318 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 TWF1Q12792 350 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 ZNF235Q14590 738 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 TGFBIQ15582 683 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 SNCBQ16143 134 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 N4BP2L1Q5TBK1 243 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 ZNF470Q6ECI4 717 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 ZYG11AQ6WRX3 759 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 CALHM1Q8IU99 346 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 OSR2Q8N2R0 312 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 NECAP1Q8NC96 275 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 OR2L3Q8NG85 312 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 OR1S2Q8NGQ3 325 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 OR10J6PQ8NGY7 276 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 COQ8AQ8NI60 647 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 TOP1MTQ969P6 601 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 SEH1LQ96EE3 360 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 ZBTB18Q99592 522 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 RNF5Q99942 180 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 MRPL57Q9BQC6 102 aaKnown RBP3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 MFSD1Q9H3U5 465 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 FBXO5Q9UKT4 447 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 ING4Q9UNL4 249 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 ACOT9Q9Y305 439 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 SNX10Q9Y5X0 201 aa3.62□□□□□ -1.83
HMGB3P14-201ENST00000494195 TSC2P49815 1807 aa3.61□□□□□ -1.83
HMGB3P14-201ENST00000494195 TRPC5OSA6NMA1 111 aa3.61□□□□□ -1.83
HMGB3P14-201ENST00000494195 ANKRD65E5RJM6 399 aa3.61□□□□□ -1.83
HMGB3P14-201ENST00000494195 COCHO43405 550 aa3.61□□□□□ -1.83
HMGB3P14-201ENST00000494195 EEDO75530 441 aaKnown RBP3.61□□□□□ -1.83
HMGB3P14-201ENST00000494195 GCM2O75603 506 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms