RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 OR9K2Q8NGE7 335 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 OR51F2Q8NH61 342 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 APH1BQ8WW43 257 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 BCL2L2Q92843 193 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-222ENST00000493919 ARL11Q969Q4 196 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 GTPBP3Q969Y2 492 aaKnown RBP10.24□□□□□ -0.77
BRCA1-222ENST00000493919 PPCDCQ96CD2 204 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 ST3GAL6Q9Y274 331 aa10.24□□□□□ -0.77
BRCA1-222ENST00000493919 M0R082 166 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 PRAF2O60831 178 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 DDAH2O95865 285 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ALDOBP05062 364 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 CT62P0C5K7 136 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 GABRB1P18505 474 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 FUT1P19526 365 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 RANP62826 216 aaKnown RBP10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ODF4Q2M2E3 257 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 MORN2Q502X0 79 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 BCL2L15Q5TBC7 163 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 HIST2H3AQ71DI3 136 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 KRTCAP2Q8N6L1 136 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ZNF738Q8NE65 137 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 OR4P4Q8NGL7 312 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 OR5M3Q8NGP4 307 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 MIB2Q96AX9 1013 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 IL4I1Q96RQ9 567 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 SOSTQ9BQB4 213 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 SYT4Q9H2B2 425 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 SLC25A19Q9HC21 320 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 OR2S2Q9NQN1 319 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 EXO1Q9UQ84 846 aaKnown RBP10.23□□□□□ -0.77
BRCA1-222ENST00000493919 CPAMD8Q8IZJ3 1885 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 CORTO00230 105 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 PRKNO60260 465 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ATP1B1P05026 303 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 FABP3P05413 133 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 OR8U9P0C7N5 309 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 CD79AP11912 226 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 S100GP29377 79 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 SSTR4P31391 388 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 SSTR5P35346 364 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 NCBP2P52298 156 aaKnown RBP eCLIP10.23□□□□□ -0.775e-10■■■■■ 33.9
BRCA1-222ENST00000493919 CKS1BP61024 79 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 RAB1AP62820 205 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ARG2P78540 354 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 SRSF4Q08170 494 aaKnown RBP10.23□□□□□ -0.77
BRCA1-222ENST00000493919 MFAP5Q13361 173 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 KEAP1Q14145 624 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 IQCJQ1A5X6 159 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 PRSS53Q2L4Q9 553 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ZNF385BQ569K4 471 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 LDLRAD2Q5SZI1 272 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 TMPPEQ6ZT21 453 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 LINC00346Q8IVM7 164 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 BEST3Q8N1M1 668 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ZNF610Q8N9Z0 462 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 OR51L1Q8NGJ5 315 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ZNF721Q8TF20 911 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 DIRAS2Q96HU8 199 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 MAGT1Q9H0U3 335 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 DPAGT1Q9H3H5 408 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 CDCP1Q9H5V8 836 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ACKR4Q9NPB9 350 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ANKRD10Q9NXR5 420 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 PLA2G3Q9NZ20 509 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 ABI3Q9P2A4 366 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 RAB22AQ9UL26 194 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 RNF150Q9ULK6 438 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 CSAG2Q9Y5P2 127 aa10.23□□□□□ -0.77
BRCA1-222ENST00000493919 TRBV2A0A0J9YWF9 115 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 M0R036 132 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 RAD51DO75771 328 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 ZFAND5O76080 213 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 MGMTP16455 207 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 BMP5P22003 454 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 MMP16P51512 607 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 NKX6-1P78426 367 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-222ENST00000493919 HSPB3Q12988 150 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 EXOSC7Q15024 291 aaKnown RBP10.22□□□□□ -0.77
BRCA1-222ENST00000493919 PRICKLE4Q2TBC4 344 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 FBLN7Q53RD9 439 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 GGNBP1Q5YKI7 109 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 C16orf47Q6ZP98 133 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-222ENST00000493919 RPS19BP1Q86WX3 136 aaKnown RBP10.22□□□□□ -0.77
BRCA1-222ENST00000493919 Q8N402 240 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 CASTOR1Q8WTX7 329 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 JSRP1Q96MG2 331 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-222ENST00000493919 ZNF681Q96N22 645 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 CHRDL1Q9BU40 450 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 METTL17Q9H7H0 456 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-222ENST00000493919 ANKRA2Q9H9E1 313 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 GPN1Q9HCN4 374 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-222ENST00000493919 UQCC1Q9NVA1 299 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 ASF1BQ9NVP2 202 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 B3GAT1Q9P2W7 334 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 CORO2BQ9UQ03 480 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 ORC6Q9Y5N6 252 aa10.22□□□□□ -0.77
BRCA1-222ENST00000493919 CDHR4A6H8M9 788 aa10.21□□□□□ -0.77
BRCA1-222ENST00000493919 TK1P04183 234 aa10.21□□□□□ -0.77
BRCA1-222ENST00000493919 IGKV3-11P04433 115 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms