RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PITPNC1Q9UKF7 332 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 SYNGR2O43760 224 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 CXCL13O43927 109 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 ORM2P19652 201 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 MMP15P51511 669 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 LIMK1P53667 647 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 WNT3P56703 355 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 KLRB1Q12918 225 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 DUSP8Q13202 625 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 MICBQ29980 383 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 NKAIN1Q4KMZ8 207 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 CARFQ8N187 725 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 PELI3Q8N2H9 469 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 OR5C1Q8NGR4 320 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 MCHR2Q969V1 340 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 MAP6Q96JE9 813 aa7.08□□□□□ -1.28
BRCA1-221ENST00000493795 SMPD2O60906 423 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 LGALS7P47929 136 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 RELBQ01201 579 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 TMEM52BQ4KMG9 183 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 OLIG3Q7RTU3 272 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 OR2W3Q7Z3T1 314 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 OR10G8Q8NGN5 311 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 PHOSPHO2Q8TCD6 241 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 FBXO17Q96EF6 278 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 ACER3Q9NUN7 267 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 COL3A1P02461 1466 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-221ENST00000493795 SPATA31D1Q6ZQQ2 1576 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 PPRC1Q5VV67 1664 aaKnown RBP7.07□□□□□ -1.28
BRCA1-221ENST00000493795 TRAV1-2A0A0B4J238 106 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 UBE2L6O14933 153 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 RAB29O14966 203 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 FABP2P12104 132 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 PLP1P60201 277 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 LYG1Q8N1E2 194 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 ZNF740Q8NDX6 193 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 PIK3IP1Q96FE7 263 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 SDF2Q99470 211 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 IL36GQ9NZH8 169 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 ICOSLGO75144 302 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 TSPAN13O95857 204 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 B4GALT1P15291 398 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 IL13RA2Q14627 380 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 LINC00303Q3SY05 128 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 XKR7Q5GH72 579 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 ZNF766Q5HY98 468 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 SLC16A13Q7RTY0 426 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 NOXO1Q8NFA2 376 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 SMIM4Q8WVI0 70 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 TEX101Q9BY14 249 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 PRDM7Q9NQW5 492 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 C20orf141Q9NUB4 165 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 CLEC1BQ9P126 229 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 A4GNTQ9UNA3 340 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 MOB4Q9Y3A3 225 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 C3orf85A0A1B0GTC6 90 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 TMEM189-UBE2V1I3L0A0 370 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 HMGN4O00479 90 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 SLCO2B1O94956 709 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 SFT2D2O95562 160 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 APCSP02743 223 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 PKIAP61925 76 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 FABP5Q01469 135 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 C1orf220Q5T0J3 134 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 TRILQ7L0X0 811 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 OR2Z1Q8NG97 314 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 SLCO1C1Q9NYB5 712 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 SNED1Q8TER0 1413 aa7.07□□□□□ -1.28
BRCA1-221ENST00000493795 ZAR1LA6NP61 321 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 TARM1B6A8C7 271 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 M0R296 226 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 ISLRO14498 428 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 GJB3O75712 270 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 NGFP01138 241 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 CD27P26842 260 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 COMPP49747 757 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-221ENST00000493795 CD81P60033 236 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 PFN3P60673 137 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 ISL1P61371 349 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 BSXQ3C1V8 233 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 FAM78AQ5JUQ0 283 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 GLCCI1Q86VQ1 547 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 MBD3L1Q8WWY6 194 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 PP6455Q8WZ26 134 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 DERL3Q96Q80 235 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 TBX15Q96SF7 602 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 LPAR3Q9UBY5 353 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 AUP1Q9Y679 476 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 MRC1P22897 1456 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 IGHV3-15A0A0B4J1V0 119 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 FBLL1A6NHQ2 334 aaKnown RBP7.06□□□□□ -1.28
BRCA1-221ENST00000493795 H7C2G1 150 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 HIST1H1EP10412 219 aaKnown RBP7.06□□□□□ -1.28
BRCA1-221ENST00000493795 HLA-GP17693 338 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 SLC37A1P57057 533 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 C19orf57Q0VDD7 668 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 MRM1Q6IN84 353 aaKnown RBP7.06□□□□□ -1.28
BRCA1-221ENST00000493795 RSRP1Q9BUV0 290 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 COA4Q9NYJ1 87 aa7.06□□□□□ -1.28
BRCA1-221ENST00000493795 PIPOXQ9P0Z9 390 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms