RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 ZNF829Q3KNS6 432 aaPredicted RBP8.81□□□□□ -1
COL6A3-214ENST00000493608 GPR157Q5UAW9 335 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 ASRGL1Q7L266 308 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 GID4Q8IVV7 300 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 BATF2Q8N1L9 274 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 C3orf56Q8N813 242 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 WDFY2Q96P53 400 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 TBX15Q96SF7 602 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 OSBPL10Q9BXB5 764 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 CLN6Q9NWW5 311 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 HAO2Q9NYQ3 351 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 KAAG1Q9UBP8 84 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 NUFIP1Q9UHK0 495 aaKnown RBP8.81□□□□□ -1
COL6A3-214ENST00000493608 MRM2Q9UI43 246 aaKnown RBP8.81□□□□□ -1
COL6A3-214ENST00000493608 ZNF391Q9UJN7 358 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 SLC22A13Q9Y226 551 aa8.81□□□□□ -1
COL6A3-214ENST00000493608 CENPVL3A0A0U1RRI6 287 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 TMEM210A6NLX4 147 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 LOC110117498-PIK3R3F6TDL0 507 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 P2RY10O00398 339 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 SRSF10O75494 262 aaKnown RBP8.8□□□□□ -1
COL6A3-214ENST00000493608 IGLV3-1P01715 115 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 LIPFP07098 398 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 DCTDP32321 178 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 GABRA2P47869 451 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 COMPP49747 757 aaPredicted RBP8.8□□□□□ -1
COL6A3-214ENST00000493608 DLX1P56177 255 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 SLC9A3R2Q15599 337 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 CEACAM21Q3KPI0 293 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 ZIK1Q3SY52 487 aaPredicted RBP8.8□□□□□ -1
COL6A3-214ENST00000493608 AWAT1Q58HT5 328 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 FAM76BQ5HYJ3 339 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 BCL2L15Q5TBC7 163 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 METTL11BQ5VVY1 283 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 PLCXD3Q63HM9 321 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 STUMQ69YW2 141 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 CCDC121Q6ZUS5 278 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 SLC36A1Q7Z2H8 476 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 YIPF7Q8N8F6 280 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 PNLDC1Q8NA58 520 aaKnown RBP8.8□□□□□ -1
COL6A3-214ENST00000493608 H1FXQ92522 213 aaKnown RBP8.8□□□□□ -1
COL6A3-214ENST00000493608 LHX4Q969G2 390 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 RAB3IPQ96QF0 476 aaPredicted RBP8.8□□□□□ -1
COL6A3-214ENST00000493608 OR51I2Q9H344 312 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 CNTD2Q9H8S5 307 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 ABCB9Q9NP78 766 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 GPR173Q9NS66 373 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 ONECUT1Q9UBC0 465 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 RPUSD1Q9UJJ7 312 aaKnown RBP8.8□□□□□ -1
COL6A3-214ENST00000493608 OR52A1Q9UKL2 312 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 R4GMQ9 66 aa8.8□□□□□ -1
COL6A3-214ENST00000493608 A0A1B0GTI1 187 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 A0A1W2PQL4 384 aaPredicted RBP8.79□□□□□ -1
COL6A3-214ENST00000493608 HOXA3O43365 443 aaPredicted RBP8.79□□□□□ -1
COL6A3-214ENST00000493608 NDUFB3O43676 98 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 NRASP01111 189 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 GLRA1P23415 457 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 HTR1FP30939 366 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 ATP6V1E1P36543 226 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 TGM4P49221 684 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 ACTR3P61158 418 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 GNG3P63215 75 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 EGR3Q06889 387 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 HAGHLQ6PII5 290 aaPredicted RBP8.79□□□□□ -1
COL6A3-214ENST00000493608 C9orf139Q6ZV77 190 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 ELMOD2Q8IZ81 293 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 OR10H4Q8NGA5 316 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 OR5A2Q8NGI9 324 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 OR10Z1Q8NGY1 313 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 OR14K1Q8NGZ2 314 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 SLC25A28Q96A46 364 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 EME1Q96AY2 570 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 ZNF488Q96MN9 340 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 GAFA1Q96PS6 74 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 RBM4BQ9BQ04 359 aaKnown RBP8.79□□□□□ -1
COL6A3-214ENST00000493608 GABARAPL3Q9BY60 117 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 SIRPDQ9H106 197 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 NLKQ9UBE8 527 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 AASSQ9UDR5 926 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 WARS2Q9UGM6 360 aaKnown RBP8.79□□□□□ -1
COL6A3-214ENST00000493608 ENOPH1Q9UHY7 261 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 ENPP5Q9UJA9 477 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 PCDHGB1Q9Y5G3 927 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 SNX5Q9Y5X3 404 aa8.79□□□□□ -1
COL6A3-214ENST00000493608 A0A1W2PRD5 423 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 A0A1W2PRF3 423 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 A0A1W2PRM7 423 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 METTL15A6NJ78 407 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 OR2AT4A6NND4 320 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 H3BNX3 289 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 EI24O14681 340 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 SYNGR1O43759 233 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 MTRF1O75570 445 aaKnown RBP8.78□□□□□ -1
COL6A3-214ENST00000493608 DHRS3O75911 302 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 ECDO95905 644 aaPredicted RBP8.78□□□□□ -1
COL6A3-214ENST00000493608 KRT8P05787 483 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 RNASE1P07998 156 aaKnown RBP8.78□□□□□ -1
COL6A3-214ENST00000493608 OR2T7P0C7T2 308 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 HKR1P10072 659 aa8.78□□□□□ -1
COL6A3-214ENST00000493608 ATP6V1B1P15313 513 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms