RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 TMEM171Q8WVE6 324 aa8.05□□□□□ -1.12
CSTF1-206ENST00000493039 GHSRQ92847 366 aa8.05□□□□□ -1.12
CSTF1-206ENST00000493039 SPSB4Q96A44 273 aa8.05□□□□□ -1.12
CSTF1-206ENST00000493039 APOBEC3DQ96AK3 386 aaPredicted RBP8.05□□□□□ -1.12
CSTF1-206ENST00000493039 MARS2Q96GW9 593 aaKnown RBP8.05□□□□□ -1.12
CSTF1-206ENST00000493039 OR2J1Q9GZK6 312 aa8.05□□□□□ -1.12
CSTF1-206ENST00000493039 ESRP2Q9H6T0 727 aaKnown RBP8.05□□□□□ -1.12
CSTF1-206ENST00000493039 NGBQ9NPG2 151 aa8.05□□□□□ -1.12
CSTF1-206ENST00000493039 TRIM36Q9NQ86 728 aa8.05□□□□□ -1.12
CSTF1-206ENST00000493039 SF3B6Q9Y3B4 125 aaKnown RBP8.05□□□□□ -1.12
CSTF1-206ENST00000493039 TRBV2A0A0J9YWF9 115 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 A4D1N5 150 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 H3BSH0 61 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 CASKO14936 926 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 TUBG1P23258 451 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 ALDH3B2P48448 385 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 RIN1Q13671 783 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 GK2Q14410 553 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-206ENST00000493039 INSL4Q14641 139 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 FAM189A2Q15884 450 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 LIPKQ5VXJ0 399 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 OR2C3Q8N628 320 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 KBTBD8Q8NFY9 601 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 OR52H1Q8NGJ2 320 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 OR13C5Q8NGS8 318 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 OR51E1Q8TCB6 317 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 SMIM19Q96E16 107 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 PIK3IP1Q96FE7 263 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 METTL9Q9H1A3 318 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 ISYNA1Q9NPH2 558 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 TUBG2Q9NRH3 451 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 AKAP6Q13023 2319 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 SPG11Q96JI7 2443 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 APCP25054 2843 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 ABCA12Q86UK0 2595 aa8.04□□□□□ -1.12
CSTF1-206ENST00000493039 hCG_1809904A0A1W2PP81 198 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 A0A1W2PPE2 198 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 A0A1W2PR64 198 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 E7EQL1 145 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 P2RY10O00398 339 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 IGHV2-70P01814 119 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 CPEP16870 476 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 ACKR3P25106 362 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 THBS4P35443 961 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 MPV17P39210 176 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 RPL5P46777 297 aaKnown RBP8.03□□□□□ -1.12
CSTF1-206ENST00000493039 CDC34P49427 236 aaPredicted RBP8.03□□□□□ -1.12
CSTF1-206ENST00000493039 RGS6P49758 472 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 PPP1CBP62140 327 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 ZNF45Q02386 682 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 ALKBH6Q3KRA9 238 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 ARL9Q6T311 187 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 Q6ZSR3 168 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 SSX9Q7RTT3 188 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 LRP11Q86VZ4 500 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 ZNF295-AS1Q8N0V1 137 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 NUP37Q8NFH4 326 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 OR1J1Q8NGS3 322 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 SLC25A40Q8TBP6 338 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 UFD1Q92890 307 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 PGAM5Q96HS1 289 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 TRAF4Q9BUZ4 470 aaPredicted RBP8.03□□□□□ -1.12
CSTF1-206ENST00000493039 MRPS26Q9BYN8 205 aaKnown RBP8.03□□□□□ -1.12
CSTF1-206ENST00000493039 SLA2Q9H6Q3 261 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 GPR84Q9NQS5 396 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 UNC79Q9P2D8 2635 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 A6NNC1 897 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 ITGB1BP1O14713 200 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 TBX1O43435 398 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 LMX1BO60663 402 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 LILRA1O75019 489 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 ISG15P05161 165 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 CCL1P22362 96 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 PSMB9P28065 219 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 GLRXP35754 106 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 TGFBR2P37173 567 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 FAM3AP98173 230 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 PSG7Q13046 419 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 SNTB2Q13425 540 aaKnown RBP8.03□□□□□ -1.12
CSTF1-206ENST00000493039 GPR50Q13585 617 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 TSTQ16762 297 aaKnown RBP8.03□□□□□ -1.12
CSTF1-206ENST00000493039 BCL2L15Q5TBC7 163 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 HIST2H2BCQ6DN03 193 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 FBXW12Q6X9E4 464 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 KLF14Q8TD94 323 aaPredicted RBP8.03□□□□□ -1.12
CSTF1-206ENST00000493039 FCGR1BQ92637 280 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 OR51M1Q9H341 326 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 ASH1LQ9NR48 2969 aaKnown RBP8.03□□□□□ -1.12
CSTF1-206ENST00000493039 CA10Q9NS85 328 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 PTTG3PQ9NZH4 202 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 EIF3KQ9UBQ5 218 aaKnown RBP8.03□□□□□ -1.12
CSTF1-206ENST00000493039 ENPP5Q9UJA9 477 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 FZR1Q9UM11 496 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 RNF115Q9Y4L5 304 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 CSMD1Q96PZ7 3565 aa8.03□□□□□ -1.12
CSTF1-206ENST00000493039 hCG_38984A0A1B0GV85 526 aa8.02□□□□□ -1.13
CSTF1-206ENST00000493039 MED6O75586 246 aa8.02□□□□□ -1.13
CSTF1-206ENST00000493039 SC5DO75845 299 aa8.02□□□□□ -1.13
CSTF1-206ENST00000493039 CD1AP06126 327 aa8.02□□□□□ -1.13
CSTF1-206ENST00000493039 CD3EP07766 207 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms