RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 DCKP27707 260 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 NANOS3P60323 173 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 HOXA4Q00056 320 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 PAX2Q02962 417 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 CNN3Q15417 329 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 SMN1Q16637 294 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 CD276Q5ZPR3 534 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 WDR25Q64LD2 544 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 ZNF841Q6ZN19 808 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 SLC36A1Q7Z2H8 476 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 ZNF573Q86YE8 665 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 C8orf59Q8N0T1 100 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 ZNF671Q8TAW3 534 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 CNIH3Q8TBE1 160 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 NANPQ8TBE9 248 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 PP6455Q8WZ26 134 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 AQP3Q92482 292 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 ZNF649Q9BS31 505 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 MRI1Q9BV20 369 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 MMP26Q9NRE1 261 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 GPR173Q9NS66 373 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 FRRS1LQ9P0K9 344 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 CTSZQ9UBR2 303 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 DNAJB11Q9UBS4 358 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 SLC7A11Q9UPY5 501 aa8.88□□□□□ -0.99
CDC42SE1-206ENST00000492796 LOC105371242A0A075B767 164 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 IGHV3OR15-7A0A075B7D8 119 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 PQLC2LA1A4F0 135 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 H0YJX3 145 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 TMPRSS2O15393 492 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 AKR7A2O43488 359 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 ENSAO43768 121 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 SERPINA3P01011 423 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 AVPP01185 164 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 CCDC159P0C7I6 412 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 LIMS3P0CW19 117 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 LIMS4P0CW20 117 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 PPIAL4GP0DN37 164 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 GLRA1P23415 457 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 HAAOP46952 286 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 TGM4P49221 684 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 GBX2P52951 348 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 MED21Q13503 144 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 ALKBH1Q13686 389 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 ATPAF1Q5TC12 328 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 STUMQ69YW2 141 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 HAGHLQ6PII5 290 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 C1orf229Q6ZS94 237 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 RAB40AQ8WXH6 277 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 DACT3Q96B18 629 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 ISG20L2Q9H9L3 353 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 RASL12Q9NYN1 266 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 NLKQ9UBE8 527 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 NKX1-2Q9UD57 310 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 OPN4Q9UHM6 478 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 HHLA2Q9UM44 414 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 DIMT1Q9UNQ2 313 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 POLDIP2Q9Y2S7 368 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 EXOSC1Q9Y3B2 195 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 AUP1Q9Y679 476 aa8.87□□□□□ -0.99
CDC42SE1-206ENST00000492796 KIR2DS1A0A191URI9 304 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 A6NIN4 97 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 NKX6-3A6NJ46 265 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 TMEM212A6NML5 194 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 OR4C45A6NMZ5 311 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 J3QT63 122 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 RHBDL1O75783 438 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 ECDO95905 644 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 FSHBP01225 129 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 PIPP12273 146 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 ZNF20P17024 532 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 MYL12AP19105 171 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 MPZP25189 248 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 FUT6P51993 359 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 PAX8Q06710 450 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 SMIM21Q3B7S5 101 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 CCDC58Q4VC31 144 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 ARMCX4Q5H9R4 360 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 TMPRSS11AQ6ZMR5 421 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 UTS2BQ765I0 119 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 RDH10Q8IZV5 341 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 ZNF676Q8N7Q3 588 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 POC1AQ8NBT0 407 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 FBLIM1Q8WUP2 373 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 TFAP2CQ92754 450 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 TMIGD2Q96BF3 282 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 TMEM80Q96HE8 168 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 NUDT16L1Q9BRJ7 211 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 PKIBQ9C010 78 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 COMMD4Q9H0A8 199 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 WDR13Q9H1Z4 485 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 VCX3BQ9H321 246 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 SMURF1Q9HCE7 757 aa8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 CNOT2Q9NZN8 540 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 CAB39Q9Y376 341 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-206ENST00000492796 EFCAB10A6NFE3 127 aa8.85□□□□□ -0.99
CDC42SE1-206ENST00000492796 OR2AT4A6NND4 320 aa8.85□□□□□ -0.99
CDC42SE1-206ENST00000492796 C22orf46C9J442 243 aa8.85□□□□□ -0.99
CDC42SE1-206ENST00000492796 H0YHG0 523 aa8.85□□□□□ -0.99
CDC42SE1-206ENST00000492796 H3BSH0 61 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms