RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 HERC2O95714 4834 aa2.28□□□□□ -2.05
SNX13-209ENST00000492626 FAM231BA6NCW3 169 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 KRTAP29-1A8MX34 341 aaPredicted RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 KMOO15229 486 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 SLC31A2O15432 143 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 SMIM24O75264 130 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 PAHP00439 452 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 FABP3P05413 133 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CT62P0C5K7 136 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CNR1P21554 472 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 ZBTB25P24278 435 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 MYL9P24844 172 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CASP1P29466 404 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 ALDH3A1P30838 453 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 PCK1P35558 622 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 MEOX2P50222 304 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CRISP1P54107 249 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 LAMTOR4Q0VGL1 99 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 XRCC4Q13426 336 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 TRMT5Q32P41 509 aaKnown RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 SLC25A25Q6KCM7 469 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 WFDC11Q8NEX6 87 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 OR52E5Q8NH55 327 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 LRRC29Q8WV35 223 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 NTAN1Q96AB6 310 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 FCRL1Q96LA6 429 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 PKMYT1Q99640 499 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 GPR21Q99679 349 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 GABARAPL3Q9BY60 117 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 C20orf85Q9H1P6 137 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CLN6Q9NWW5 311 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 FAM32AQ9Y421 112 aaKnown RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 GMEB1Q9Y692 573 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 USP9YO00507 2555 aaPredicted RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 IGLV3-22A0A075B6J6 115 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 IGHV5-10-1A0A0J9YXX1 117 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 GABRR3A8MPY1 467 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CLDN34H7C241 214 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 HPNP05981 417 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 FOLR2P14207 255 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 OR1E1P30953 314 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 RGRP47804 291 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 KDSRQ06136 332 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 KIAA0087Q14695 138 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 HSP90B2PQ58FF3 399 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 PIANPQ8IYJ0 282 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 FAM57AQ8TBR7 257 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 ZFP90Q8TF47 636 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 C6orf50Q9HD87 102 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 UVRAGQ9P2Y5 699 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 HMGXB4Q9UGU5 601 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 FARSAQ9Y285 508 aaKnown RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 SETD2Q9BYW2 2564 aaPredicted RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 PRSS37A4D1T9 235 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 LIN7AO14910 233 aaPredicted RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 MRPS12O15235 138 aaKnown RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 HDAC3O15379 428 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 NUPL2O15504 423 aaKnown RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 TSPAN13O95857 204 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CT45A6P0DMU7 189 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CT45A5P0DMU8 189 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CT45A7P0DMV0 189 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 GFAPP14136 432 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 PRKACBP22694 351 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CYB561P49447 251 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CDH17Q12864 832 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 FZD2Q14332 565 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 GPR176Q14439 515 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 PIGHQ14442 188 aaPredicted RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 ZBTB6Q15916 424 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CT45A1Q5HYN5 189 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 ANKRD22Q5VYY1 191 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 C3orf62Q6ZUJ4 267 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 NATD1Q8N6N6 113 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 GATSQ8NAP1 163 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CHST4Q8NCG5 386 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 CT45A3Q8NHU0 189 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 NUBPLQ8TB37 319 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 ZNF418Q8TF45 676 aaPredicted RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 C16orf74Q96GX8 76 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 PARP12Q9H0J9 701 aaKnown RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 TMEM38AQ9H6F2 299 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 STOX2Q9P2F5 926 aaPredicted RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 CTSFQ9UBX1 484 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 ABCA7Q8IZY2 2146 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 NCKAP5O14513 1909 aa2.27□□□□□ -2.05
SNX13-209ENST00000492626 FN1P02751 2386 aaKnown RBP2.27□□□□□ -2.05
SNX13-209ENST00000492626 A0A087WYN8 130 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 GJE1A6NN92 205 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 KLRC4-KLRK1H3BQV0 150 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 H7C2Y5 167 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 SIVA1O15304 175 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 TNFP01375 233 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 IGHV3-23P01764 117 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 SERPINE2P07093 398 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 PPP1R2P41236 205 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 CSNK1DP48730 415 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 HADHBP55084 474 aaKnown RBP2.26□□□□□ -2.05
SNX13-209ENST00000492626 B2MP61769 119 aa2.26□□□□□ -2.05
SNX13-209ENST00000492626 GNGT1P63211 74 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms