RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 ERMAPQ96PL5 475 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 SLC6A7Q99884 636 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZNF2Q9BSG1 426 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZNF436Q9C0F3 470 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 ACTR3CQ9C0K3 210 aaPredicted RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 POLR2J2Q9GZM3 115 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 ACTR6Q9GZN1 396 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 SHARPINQ9H0F6 387 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 PCBD2Q9H0N5 130 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZNF665Q9H7R5 613 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 AMBNQ9NP70 447 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 IFT46Q9NQC8 304 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 TXNL4BQ9NX01 149 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 TECRQ9NZ01 308 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZNF224Q9NZL3 707 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 ZNF319Q9P2F9 582 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 DUX4Q9UBX2 424 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 SCP2D1Q9UJQ7 156 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 FBXL2Q9UKC9 423 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 MGAT4AQ9UM21 535 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 NDRG2Q9UN36 371 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 YARS2Q9Y2Z4 477 aaKnown RBP4.08□□□□□ -1.76
RTN4-215ENST00000491592 NUBP2Q9Y5Y2 271 aa4.08□□□□□ -1.76
RTN4-215ENST00000491592 NUP214P35658 2090 aaPredicted RBP4.07□□□□□ -1.76
RTN4-215ENST00000491592 PATJQ8NI35 1801 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 DSPPQ9NZW4 1301 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 GLYATL1P3A0A0U1RQE8 302 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 TRDV1A0A1B0GX56 115 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 MYBPHLA2RUH7 354 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 LINC01553A4QN01 128 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 C15orf62A8K5M9 175 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 LOC730098B7Z3J9 87 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 CCL22O00626 93 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 TNFSF11O14788 317 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 SH2D1BO14796 132 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 PPP1R2P9O14990 202 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 CHP2O43745 196 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 HPGDSO60760 199 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 STK16O75716 305 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 GADD45GO95257 159 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 FGF19O95750 216 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 RAB36O95755 333 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 TSPAN13O95857 204 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 LALBAP00709 142 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 IFNA21P01568 189 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 HLA-AP01891 365 aaKnown RBP4.07□□□□□ -1.76
RTN4-215ENST00000491592 APOC1P02654 83 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 LINC00614P0C842 121 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 MYOGP15173 224 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 ZNF250P15622 560 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 GATA1P15976 413 aaPredicted RBP4.07□□□□□ -1.76
RTN4-215ENST00000491592 DPEP1P16444 411 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 UGT2B7P16662 529 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 SLC6A1P30531 599 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 NKX2-1P43699 371 aaPredicted RBP4.07□□□□□ -1.76
RTN4-215ENST00000491592 CSNK1A1P48729 337 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 DLX5P56178 289 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 CLDN6P56747 220 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 TAS2R38P59533 333 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 MAXP61244 160 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 RPL19P84098 196 aaKnown RBP4.07□□□□□ -1.76
RTN4-215ENST00000491592 HOXC5Q00444 222 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 DHODHQ02127 395 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 C2orf80Q0P641 193 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 HAGHQ16775 308 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 NDUFA9Q16795 377 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 RPEL1Q2QD12 228 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 SPIN4Q56A73 249 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 TIMM23BQ5SRD1 257 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 C1orf189Q5VU69 101 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 FAM219BQ5XKK7 198 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 C12orf73Q69YU5 71 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 LEG1Q6P5S2 330 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 CNIH2Q6PI25 160 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 CD200R1LQ6Q8B3 271 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 DRAM2Q6UX65 266 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 CASP12Q6UXS9 341 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 TFAP2EQ6VUC0 442 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 RBMS3Q6XE24 437 aaKnown RBP4.07□□□□□ -1.76
RTN4-215ENST00000491592 GLT6D1Q7Z4J2 308 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 COX8CQ7Z4L0 72 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 LINC00471Q8N535 108 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 OR4K2Q8NGD2 314 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 OR13C4Q8NGS5 318 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 OR9A4Q8NGU2 314 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 OR2Y1Q8NGV0 311 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 LYPD6BQ8NI32 183 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 RNF128Q8TEB7 428 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 BAALCQ8WXS3 180 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 BADQ92934 168 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 UBE2E3Q969T4 207 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 RPEQ96AT9 228 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 ANKRD9Q96BM1 317 aaPredicted RBP4.07□□□□□ -1.76
RTN4-215ENST00000491592 NXPE2Q96DL1 559 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 MAP3K3Q99759 626 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 ATP5SQ99766 215 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 SLC35A5Q9BS91 424 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 OR51M1Q9H341 326 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 TMEM38AQ9H6F2 299 aa4.07□□□□□ -1.76
RTN4-215ENST00000491592 C11orf49Q9H6J7 331 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms