RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 GPR3P46089 330 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 GABREP78334 506 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 PCK2Q16822 640 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 DEFB133Q30KQ1 61 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 CDPF1Q6NVV7 123 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 CTHRC1Q96CG8 243 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 METTL1Q9UBP6 276 aaKnown RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 UNC80Q8N2C7 3258 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 GATCO43716 136 aaKnown RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 SOX15O60248 233 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 TTRP02766 147 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 SMIM10L1P0DMW3 83 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 NR2C1P13056 603 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 PRF1P14222 555 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 ZNF708P17019 499 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 TESK1Q15569 626 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 LINC00114Q6XXX2 140 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 H1FNTQ75WM6 255 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 MRPL41Q8IXM3 137 aaKnown RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 SMIM10Q96HG1 83 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 BMFQ96LC9 184 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 PLA2G2FQ9BZM2 168 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 LPAR5Q9H1C0 372 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 PARP11Q9NR21 331 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 DENND4AQ7Z401 1863 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 AHCTF1Q8WYP5 2266 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 E5RGE8 158 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 H3BQ15 152 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 HMGB3O15347 200 aaKnown RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 TLX3O43711 291 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 RAMP1O60894 148 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 RAD51DO75771 328 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 OR7C1O76099 320 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 CNOT4O95628 575 aaKnown RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 DBHP09172 617 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 MMP7P09237 267 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 ADIRFQ15847 76 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 TMEM268Q5VZI3 342 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 FAHD2BQ6P2I3 314 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 BADQ92934 168 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 FAHD2AQ96GK7 314 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 TPSD1Q9BZJ3 242 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 DNAJB11Q9UBS4 358 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 WASF3Q9UPY6 502 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 NSG2Q9Y328 171 aa8.7□□□□□ -1.02
ERCC3-208ENST00000491292 TMEM184BQ9Y519 407 aaPredicted RBP8.7□□□□□ -1.02
ERCC3-208ENST00000491292 IGKV1D-43A0A0B4J1Z2 117 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 H3BMH7 237 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 UBE2CO00762 179 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 F10P00742 488 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 GNRH1P01148 92 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 LBX1P52954 281 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 DLK1P80370 383 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 FAM189A2Q15884 450 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 ISXQ2M1V0 245 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 Q3ZCU0 254 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 PLAC9Q5JTB6 97 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 ASPHD2Q6ICH7 369 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 PARM1Q6UWI2 310 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 PRR18Q8N4B5 295 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 SLC46A1Q96NT5 459 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 SYT3Q9BQG1 590 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 KLF15Q9UIH9 416 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 PIGLQ9Y2B2 252 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 SHANK1Q9Y566 2161 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 G3V3Y1 287 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 PLPP3O14495 311 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 WISP1O95388 367 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 SCGB1D1O95968 90 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 IL2RAP01589 272 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 GUSBP08236 651 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 GSTP1P09211 210 aaKnown RBP8.69□□□□□ -1.02
ERCC3-208ENST00000491292 MMP9P14780 707 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 TMEM176BQ3YBM2 270 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-208ENST00000491292 NKAIN1Q4KMZ8 207 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 SLC22A25Q6T423 547 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 CMTM1Q8IZ96 169 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 PAQR4Q8N4S7 273 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-208ENST00000491292 OR14L1PQ8NHC6 308 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 SCGB1C1Q8TD33 95 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 TMEM230Q96A57 120 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 RAB39BQ96DA2 213 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 KLHDC7BQ96G42 594 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 SERINC1Q9NRX5 453 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 WSB1Q9Y6I7 421 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 COL4A4P53420 1690 aaPredicted RBP8.69□□□□□ -1.02
ERCC3-208ENST00000491292 HTTP42858 3142 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 FAM221BA6H8Z2 402 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 IL33O95760 270 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 MT-ATP6P00846 226 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 IFNA5P01569 189 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 BGLAPP02818 100 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 LCATP04180 440 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 PTGER4P35408 488 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 NOVA1P51513 510 aaKnown RBP8.69□□□□□ -1.02
ERCC3-208ENST00000491292 RUNX1Q01196 453 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 PHF19Q5T6S3 580 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 PRAMEF20Q5VT98 475 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 GRINAQ7Z429 371 aa8.69□□□□□ -1.02
ERCC3-208ENST00000491292 LURAP1LQ8IV03 231 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms