RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 EIF3KQ9UBQ5 218 aaKnown RBP2.21□□□□□ -2.06
PHC3-213ENST00000491258 CHRNA9Q9UGM1 479 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 BTNL2Q9UIR0 455 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 GPR132Q9UNW8 380 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 TRAPPC4Q9Y296 219 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 SLC35A3Q9Y2D2 325 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 HDGFL3Q9Y3E1 203 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 SLC25A15Q9Y619 301 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 ZNF469Q96JG9 3925 aaPredicted RBP2.21□□□□□ -2.06
PHC3-213ENST00000491258 SCN8AQ9UQD0 1980 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 MYLKQ15746 1914 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 CEP192Q8TEP8 1941 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 CUBNO60494 3623 aa2.21□□□□□ -2.06
PHC3-213ENST00000491258 KIAA1109Q2LD37 5005 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 SHANK1Q9Y566 2161 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 MYH10P35580 1976 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 TMED7-TICAM2A0A0A6YYA0 188 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 RNF103-CHMP3A0A140T963 221 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 A0A1W2PP18 115 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 CIB4A0PJX0 185 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 TMEM72A0PK05 275 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 CFAP73A6NFT4 308 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 RNF212BA8MTL3 300 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 FAAHO00519 579 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 GPR171O14626 319 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ABCD4O14678 606 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ZNF208O43345 1280 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 SYT7O43581 403 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 EIF1BO60739 113 aaKnown RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 NPIPB7O75200 414 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 MRPL33O75394 65 aaKnown RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 RAD51DO75771 328 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 CPSF4O95639 269 aaKnown RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 IGHV3-9P01782 118 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 SBK2P0C263 348 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 CCNA2P20248 432 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 RPS4Y1P22090 263 aaKnown RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 S100A3P33764 101 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ACAA2P42765 397 aaKnown RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 MAGEA8P43361 318 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 IDH2P48735 452 aaKnown RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 RPL14P50914 215 aaKnown RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 ZNF83P51522 516 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 CCR4P51679 360 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 EFNA4P52798 201 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 OR2B6P58173 313 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 SLC35A1P78382 337 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 VLDLRP98155 873 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 LOXL1Q08397 574 aaPredicted RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 DMTNQ08495 405 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 CD47Q08722 323 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 FUT5Q11128 374 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 STX3Q13277 289 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 RAB35Q15286 201 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 CHI3L2Q15782 390 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 STK11Q15831 433 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 GABRA6Q16445 453 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 SYPL1Q16563 259 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 C1QTNF12Q5T7M4 302 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ATAD3BQ5T9A4 648 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 TSPO2Q5TGU0 170 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 WDR25Q64LD2 544 aaPredicted RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 C11orf71Q6IPW1 123 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 C3orf33Q6P1S2 294 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 B3GLCTQ6Y288 498 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 LRRC74BQ6ZQY2 392 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ZNF621Q6ZSS3 439 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 C16orf62Q7Z3J2 963 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 GRINAQ7Z429 371 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 KRT77Q7Z794 578 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 HMGN2P46Q86SG4 172 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 LRRC34Q8IZ02 419 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 UBE2J2Q8N2K1 259 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 MREGQ8N565 214 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ARFGAP2Q8N6H7 521 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 TMCO5AQ8N6Q1 288 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ANKFN1Q8N957 763 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ICA1LQ8NDH6 482 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 OR52E4Q8NGH9 312 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 OR4A15Q8NGL6 344 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 PIGXQ8TBF5 258 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 IL22RA2Q969J5 263 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 TMEM45BQ96B21 275 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 APH1AQ96BI3 265 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ROPN1LQ96C74 230 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 PPP1R36Q96LQ0 422 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 RAB40CQ96S21 281 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 SORT1Q99523 831 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 DHRS9Q9BPW9 319 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 SLC35A5Q9BS91 424 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 C1QTNF6Q9BXI9 259 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 CACNG6Q9BXT2 260 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 PARD6BQ9BYG5 372 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 DPY30Q9C005 99 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 SLC38A1Q9H2H9 487 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 MEAF6Q9HAF1 191 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ZNF331Q9NQX6 463 aaPredicted RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 YAE1D1Q9NRH1 226 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 GPR173Q9NS66 373 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 CBLN4Q9NTU7 201 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms