RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 JAGN1Q8N5M9 183 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 ITLN1Q8WWA0 313 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 NEU4Q8WWR8 484 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-230ENST00000491028 ERGIC1Q969X5 290 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 DGCR14Q96DF8 476 aaKnown RBP15.79■□□□□ 0.12
MCF2L-230ENST00000491028 SPACA5Q96QH8 159 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 GFI1Q99684 422 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 TLNRD1Q9H1K6 362 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 OR51I2Q9H344 312 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 CXorf56Q9H5V9 222 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 SAP30LQ9HAJ7 183 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 EDARQ9UNE0 448 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 AK6Q9Y3D8 172 aaKnown RBP15.79■□□□□ 0.12
MCF2L-230ENST00000491028 V9GY05 133 aa15.79■□□□□ 0.12
MCF2L-230ENST00000491028 MAST4O15021 2626 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 TPD52L2O43399 206 aaKnown RBP15.78■□□□□ 0.12
MCF2L-230ENST00000491028 CFPP27918 469 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 RANBP1P43487 201 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 HAAOP46952 286 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 CCL8P80075 99 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 RIN1Q13671 783 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 C1orf100Q5SVJ3 147 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 SORCS2Q96PQ0 1159 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 GPER1Q99527 375 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 PKIBQ9C010 78 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 DCSTAMPQ9H295 470 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 NAV2Q8IVL1 2488 aa15.78■□□□□ 0.12
MCF2L-230ENST00000491028 PTPN13Q12923 2485 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 TANC2Q9HCD6 1990 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 NOTOA8MTQ0 251 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 J3QT63 122 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 TMEM127O75204 238 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 NCR1O76036 304 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 GRPP07492 148 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 MPZP25189 248 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 RPS19P39019 145 aaKnown RBP15.77■□□□□ 0.12
MCF2L-230ENST00000491028 ZP1P60852 638 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 MXD1Q05195 221 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 SPCS2Q15005 226 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 PRAMEF6Q5VXH4 476 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 CRIP3Q6Q6R5 217 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 CROCCP3Q8IVE0 287 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 OR6M1Q8NGM8 313 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 NDNFQ8TB73 568 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 RFT1Q96AA3 541 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 FN3KRPQ9HA64 309 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 POLDIP2Q9Y2S7 368 aa15.77■□□□□ 0.12
MCF2L-230ENST00000491028 HECTD1Q9ULT8 2610 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 A0A0G2JK05 382 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 A6NLC8 198 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 IFNL4K9M1U5 179 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 SLC17A2O00624 439 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 CLEC2LP0C7M8 214 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 CDKN1AP38936 164 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 POU3F4P49335 361 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 OR10A3P58181 314 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 IL24Q13007 206 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 FOXB2Q5VYV0 432 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 HAGHLQ6PII5 290 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-230ENST00000491028 NR2C2APQ86WQ0 139 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 CALHM1Q8IU99 346 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 SAXO1Q8IYX7 474 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 ZSCAN4Q8NAM6 433 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-230ENST00000491028 SCCPDHQ8NBX0 429 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 AQP3Q92482 292 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 PLGRKTQ9HBL7 147 aa15.76■□□□□ 0.11
MCF2L-230ENST00000491028 IFITM5A6NNB3 132 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 AIPO00170 330 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 CYB5AP00167 134 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 PTGFRP43088 359 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 KRTAP10-9P60411 292 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 MRPS11P82912 194 aaKnown RBP15.75■□□□□ 0.11
MCF2L-230ENST00000491028 PDZK1IP1Q13113 114 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 MPPED2Q15777 294 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 FAM166AQ6J272 317 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 SFXN4Q6P4A7 337 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 RNF144BQ7Z419 303 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 ANGPTL5Q86XS5 388 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 MKXQ8IYA7 352 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 PXT1Q8NFP0 134 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 OR5D18Q8NGL1 313 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 Q8TCH9 128 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 TNFAIP8L1Q8WVP5 186 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 HPS1Q92902 700 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 SLC25A46Q96AG3 418 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 LIME1Q9H400 295 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 CNTD2Q9H8S5 307 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 GCM1Q9NP62 436 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 PPP1R3CQ9UQK1 317 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 LRBAP50851 2863 aa15.75■□□□□ 0.11
MCF2L-230ENST00000491028 CRYBG3Q68DQ2 2970 aa15.74■□□□□ 0.11
MCF2L-230ENST00000491028 CHD3Q12873 2000 aaKnown RBP15.74■□□□□ 0.11
MCF2L-230ENST00000491028 SMIM30A4D0T7 59 aa15.74■□□□□ 0.11
MCF2L-230ENST00000491028 CDIPTO14735 213 aa15.74■□□□□ 0.11
MCF2L-230ENST00000491028 HPXP02790 462 aa15.74■□□□□ 0.11
MCF2L-230ENST00000491028 ACAA1P09110 424 aaPredicted RBP15.74■□□□□ 0.11
MCF2L-230ENST00000491028 TMEM225BP0DP42 221 aa15.74■□□□□ 0.11
MCF2L-230ENST00000491028 PAX1P15863 534 aa15.74■□□□□ 0.11
MCF2L-230ENST00000491028 HTR2CP28335 458 aa15.74■□□□□ 0.11
MCF2L-230ENST00000491028 CFHR2P36980 270 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms