RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 CKLFQ9UBR5 152 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 POLDIP2Q9Y2S7 368 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 WIPI2Q9Y4P8 454 aa13.33□□□□□ -0.28
TRA2A-208ENST00000490942 ITPR3Q14573 2671 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 OTOGQ6ZRI0 2925 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 IGKV1-9A0A0C4DH69 117 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 A6NIN4 97 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 TRIM64CA6NLI5 447 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 H3BSH0 61 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 J3QT63 122 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 NOS1APO75052 506 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-208ENST00000490942 IGHV2-70P01814 119 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 ALDOBP05062 364 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 RAB3AP20336 220 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 GALP22466 123 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 AZGP1P25311 298 aaKnown RBP13.32□□□□□ -0.28
TRA2A-208ENST00000490942 GABRA5P31644 462 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 MDH2P40926 338 aaKnown RBP13.32□□□□□ -0.28
TRA2A-208ENST00000490942 ATP1B3P54709 279 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 PPP3R1P63098 170 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 KCNJ8Q15842 424 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 SYT6Q5T7P8 510 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-208ENST00000490942 LIPKQ5VXJ0 399 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 UNQ9370/PRO34162Q6UXP9 181 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 LRRC28Q86X40 367 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-208ENST00000490942 SPICQ8N5J4 248 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 TSPAN14Q8NG11 270 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 ZNF420Q8TAQ5 688 aaPredicted RBP13.32□□□□□ -0.28
TRA2A-208ENST00000490942 AQP3Q92482 292 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 C12orf43Q96C57 262 aaKnown RBP13.32□□□□□ -0.28
TRA2A-208ENST00000490942 COX4I2Q96KJ9 171 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 DERL3Q96Q80 235 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 UFSP2Q9NUQ7 469 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 FOXJ3Q9UPW0 622 aa13.32□□□□□ -0.28
TRA2A-208ENST00000490942 PPIAL4EA0A075B759 164 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 SRRM5B3KS81 715 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 PPIAL4DF5H284 164 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 CDIPTO14735 213 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 NDUFA2O43678 99 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 OCMP0CE72 109 aaPredicted RBP13.31□□□□□ -0.28
TRA2A-208ENST00000490942 PPIAL4FP0DN26 164 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 IGFBP3P17936 291 aaPredicted RBP13.31□□□□□ -0.28
TRA2A-208ENST00000490942 HAAOP46952 286 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 SOX2P48431 317 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 IL24Q13007 206 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 ARMCX4Q5H9R4 360 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 TEX36Q5VZQ5 186 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 CDH26Q8IXH8 852 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 GCSAMQ8N6F7 178 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 OR13C9Q8NGT0 318 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 OR14A2Q96R54 314 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 TMUB1Q9BVT8 246 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 RHOFQ9HBH0 211 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 TMEM138Q9NPI0 162 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 NDUFB11Q9NX14 153 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 RASL12Q9NYN1 266 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 SF3B6Q9Y3B4 125 aaKnown RBP13.31□□□□□ -0.28
TRA2A-208ENST00000490942 PPIAL4AQ9Y536 164 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 DYSFO75923 2080 aa13.31□□□□□ -0.28
TRA2A-208ENST00000490942 PNMA8CA0A1B0GUJ8 204 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 hCG_1807616A0A1W2PRN6 198 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 LGALS8O00214 317 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 CCRL2O00421 344 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 MAGEB3O15480 346 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 CYB5R3P00387 301 aaPredicted RBP13.3□□□□□ -0.28
TRA2A-208ENST00000490942 HEXAP06865 529 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 MUC1P15941 1255 aaPredicted RBP13.3□□□□□ -0.28
TRA2A-208ENST00000490942 MTCP1P56278 107 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 ACSM3Q53FZ2 586 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 ASPHD2Q6ICH7 369 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 HAGHLQ6PII5 290 aaPredicted RBP13.3□□□□□ -0.28
TRA2A-208ENST00000490942 CD200R1LQ6Q8B3 271 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 FAM90A1Q86YD7 464 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 ZSCAN4Q8NAM6 433 aaPredicted RBP13.3□□□□□ -0.28
TRA2A-208ENST00000490942 OR13C5Q8NGS8 318 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 LRRC29Q8WV35 223 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 RPL3LQ92901 407 aaKnown RBP13.3□□□□□ -0.28
TRA2A-208ENST00000490942 C18orf12Q96KH6 178 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 TREM2Q9NZC2 230 aa13.3□□□□□ -0.28
TRA2A-208ENST00000490942 TRAV38-1A0A0B4J264 116 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 IGHV4-61A0A0C4DH41 118 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 IGHV3-64DA0A0J9YX35 117 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 FAM230AA0A1W2PPH8 454 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 MEGF11A6BM72 1044 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 RNF223E7ERA6 249 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 H7C1Q1 480 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 ARL6IP5O75915 188 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 TGFBR2P37173 567 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 ZMYND11Q15326 602 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 ZNF404Q494X3 552 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 ZNF826PQ6ZT77 177 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 SAXO1Q8IYX7 474 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 NKAIN3Q8N8D7 197 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 POC1AQ8NBT0 407 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 RAB39BQ96DA2 213 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 C1orf159Q96HA4 380 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 TMED9Q9BVK6 235 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 DNTTIP1Q9H147 329 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 TMEM165Q9HC07 324 aa13.29□□□□□ -0.28
TRA2A-208ENST00000490942 DCAF16Q9NXF7 216 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms