RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	ADH6	P28332	368 aa		13.72	□□□□□ -0.21
BRD9-208	ENST00000489816	ZNF585A	Q6P3V2	769 aa		13.72	□□□□□ -0.21
BRD9-208	ENST00000489816	LRRC46	Q96FV0	321 aa		13.72	□□□□□ -0.21
BRD9-208	ENST00000489816	ANGPTL4	Q9BY76	406 aa		13.72	□□□□□ -0.21
BRD9-208	ENST00000489816	COLQ	Q9Y215	455 aa	Predicted RBP	13.72	□□□□□ -0.21
BRD9-208	ENST00000489816	FLVCR1	Q9Y5Y0	555 aa		13.72	□□□□□ -0.21
BRD9-208	ENST00000489816	CACNA1H	O95180	2353 aa		13.72	□□□□□ -0.21
BRD9-208	ENST00000489816		A0A096LPE4	126 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816		A0A1W2PPZ6	126 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	FAM74A7	A6NL05	159 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	CALCR	P30988	508 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	HTR5A	P47898	357 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	PPIA	P62937	165 aa	Known RBP	13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	MC2R	Q01718	297 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	IL11RA	Q14626	422 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	FAM74A3	Q4VXF1	159 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	PAN3	Q58A45	887 aa	Known RBP	13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	REEP6	Q96HR9	211 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	PCDHGA1	Q9Y5H4	931 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	CEP250	Q9BV73	2442 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	IGKV1-27	A0A075B6S5	117 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	KRBOX1	C9JBD0	128 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	FBXO24	O75426	580 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	ZNF84	P51523	738 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	CEACAM16	Q2WEN9	425 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	LPCAT3	Q6P1A2	487 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	HDDC2	Q7Z4H3	204 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	NECAB3	Q96P71	396 aa	Predicted RBP	13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	GPHA2	Q96T91	129 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	ARPC5L	Q9BPX5	153 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	HES7	Q9BYE0	225 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	DEPP	Q9NTK1	212 aa		13.71	□□□□□ -0.21
BRD9-208	ENST00000489816	SPTBN2	O15020	2390 aa		13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	PINLYP	A6NC86	204 aa		13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	TUBAL3	A6NHL2	446 aa		13.71	□□□□□ -0.22
BRD9-208	ENST00000489816		P04436	131 aa		13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	RCC1	P18754	421 aa	Predicted RBP	13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	NOVA1	P51513	510 aa	Known RBP	13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	AIMP2	Q13155	320 aa	Known RBP	13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	RSU1	Q15404	277 aa		13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	SEMA6D	Q8NFY4	1073 aa		13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	PIGC	Q92535	297 aa		13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	LIME1	Q9H400	295 aa		13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF107	Q9UII5	783 aa	Predicted RBP	13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	NXT1	Q9UKK6	140 aa	Known RBP	13.71	□□□□□ -0.22
BRD9-208	ENST00000489816	TECTA	O75443	2155 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF850	A8MQ14	1090 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	GPR31	O00270	319 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	SLC33A1	O00400	549 aa	Predicted RBP	13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	HSPB6	O14558	160 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	LSM6	P62312	80 aa	Known RBP	13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	PHLDA2	Q53GA4	152 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	AAED1	Q7RTV5	226 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	ADPRHL1	Q8NDY3	354 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	NAA11	Q9BSU3	229 aa	Predicted RBP	13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	CHST5	Q9GZS9	411 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	OR51B6	Q9H340	312 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	HRH4	Q9H3N8	390 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	PISD	Q9UG56	409 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	CACNA1D	Q01668	2161 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	GEMIN2	O14893	280 aa	Known RBP	13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	LAMTOR5	O43504	91 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	EIF1B	O60739	113 aa	Known RBP	13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	CBR3	O75828	277 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	SFT2D2	O95562	160 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	SLC25A4	P12235	298 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	ID4	P47928	161 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	VASH2	Q86V25	355 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	SPTSSA	Q969W0	71 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	SLC25A32	Q9H2D1	315 aa		13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	BARX1	Q9HBU1	254 aa	Predicted RBP	13.7	□□□□□ -0.22
BRD9-208	ENST00000489816	LOC102723996	A0A087X1L8	192 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	CDK2AP1	O14519	115 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	MSTN	O14793	375 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	GDF1	P27539	372 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	RAC1	P63000	192 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	EXT1	Q16394	746 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	AKIRIN2	Q53H80	203 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	OR2A2	Q6IF42	318 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	MOB3C	Q70IA8	216 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	TIPARP	Q7Z3E1	657 aa	Known RBP	13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	OR10D3	Q8NH80	312 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	HAS2	Q92819	552 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	FAM96B	Q9Y3D0	163 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	ESPL1	Q14674	2120 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	MED19	A0JLT2	244 aa	Predicted RBP	13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	SCGN	O76038	276 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	CELA3A	P09093	270 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	CCL1	P22362	96 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	PTGER4	P35408	488 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	MLF1	P58340	268 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	OVCH2	Q7RTZ1	564 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	ARRDC1	Q8N5I2	433 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	TMEM54	Q969K7	222 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	PIK3IP1	Q96FE7	263 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	OCSTAMP	Q9BR26	566 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF700	Q9H0M5	742 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms