RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 RASSF4Q9H2L5 321 aa12.09□□□□□ -0.47
HLA-F-229ENST00000489502 OR51I2Q9H344 312 aa12.09□□□□□ -0.47
HLA-F-229ENST00000489502 ZNF665Q9H7R5 613 aa12.09□□□□□ -0.47
HLA-F-229ENST00000489502 LPAR2Q9HBW0 351 aa12.09□□□□□ -0.47
HLA-F-229ENST00000489502 HIVEP2P31629 2446 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 IGKV1-27A0A075B6S5 117 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 PPIAL4EA0A075B759 164 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 IGKV1-9A0A0C4DH69 117 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 CEACAM18A8MTB9 384 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 FAM157AC9JC47 383 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 PPIAL4DF5H284 164 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 PLATP00750 562 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 PPIAL4FP0DN26 164 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 CELP19835 753 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 LMO4P61968 165 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 CNN3Q15417 329 aaKnown RBP12.08□□□□□ -0.48
HLA-F-229ENST00000489502 BATF2Q8N1L9 274 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 GPR148Q8TDV2 347 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 C10orf35Q96D05 121 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 MSI2Q96DH6 328 aaKnown RBP12.08□□□□□ -0.48
HLA-F-229ENST00000489502 SEH1LQ96EE3 360 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 SLC7A11Q9UPY5 501 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 ZNF281Q9Y2X9 895 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 PPIAL4AQ9Y536 164 aa12.08□□□□□ -0.48
HLA-F-229ENST00000489502 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.07□□□□□ -0.48
HLA-F-229ENST00000489502 J3QT63 122 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 LGALS8O00214 317 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 AKR7A2O43488 359 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 SYNGR1O43759 233 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 OCM2P0CE71 109 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 ATF1P18846 271 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 AZGP1P25311 298 aaKnown RBP12.07□□□□□ -0.48
HLA-F-229ENST00000489502 HAAOP46952 286 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 GZMKP49863 264 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 GABARAPL2P60520 117 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 SEC61A1P61619 476 aaKnown RBP12.07□□□□□ -0.48
HLA-F-229ENST00000489502 SPHARQ15513 63 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 ZNF404Q494X3 552 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 TMEM155Q4W5P6 130 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 FAM76BQ5HYJ3 339 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 ASPHD2Q6ICH7 369 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 UTS2BQ765I0 119 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 LRRC28Q86X40 367 aaPredicted RBP12.07□□□□□ -0.48
HLA-F-229ENST00000489502 ANGPTL5Q86XS5 388 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 CALHM1Q8IU99 346 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 MUC20Q8N307 709 aaPredicted RBP12.07□□□□□ -0.48
HLA-F-229ENST00000489502 SPICQ8N5J4 248 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 AQP3Q92482 292 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 RFT1Q96AA3 541 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 ORAI1Q96D31 301 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 RAB39BQ96DA2 213 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 ZNF488Q96MN9 340 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 SPACA5Q96QH8 159 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 TMEM246Q9BRR3 403 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 WDR13Q9H1Z4 485 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 TAS2R4Q9NYW5 299 aa12.07□□□□□ -0.48
HLA-F-229ENST00000489502 FN1P02751 2386 aaKnown RBP12.07□□□□□ -0.48
HLA-F-229ENST00000489502 ARHGAP32A7KAX9 2087 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 TRBV5-5A0A0J9YX44 114 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 OOEPA6NGQ2 149 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 SRRM5B3KS81 715 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 CD5LO43866 347 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 SERPINA3P01011 423 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 LHBP01229 141 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 HEXAP06865 529 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 OCMP0CE72 109 aaPredicted RBP12.06□□□□□ -0.48
HLA-F-229ENST00000489502 HSMCR30P0CW71 290 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 RPS2P15880 293 aaKnown RBP12.06□□□□□ -0.48
HLA-F-229ENST00000489502 RPS11P62280 158 aaKnown RBP eCLIP12.06□□□□□ -0.48
HLA-F-229ENST00000489502 BDH1Q02338 343 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 TBCEQ15813 527 aaPredicted RBP12.06□□□□□ -0.48
HLA-F-229ENST00000489502 LYPD2Q6UXB3 125 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 RNF144BQ7Z419 303 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 FAM90A1Q86YD7 464 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 OR51A2Q8NGJ7 313 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 TMEM106AQ96A25 262 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 BORCS8Q96FH0 119 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 TECTBQ96PL2 329 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 OR14A2Q96R54 314 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 TMEM165Q9HC07 324 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 SNTG1Q9NSN8 517 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 PCDHB10Q9UN67 800 aa12.06□□□□□ -0.48
HLA-F-229ENST00000489502 F5H0A9 414 aaPredicted RBP12.05□□□□□ -0.48
HLA-F-229ENST00000489502 PLPP2O43688 288 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 GYPAP02724 150 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 TFF1P04155 84 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 CD2P06729 351 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 RPSAP08865 295 aaKnown RBP12.05□□□□□ -0.48
HLA-F-229ENST00000489502 POU3F4P49335 361 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 FUT6P51993 359 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 ACSM1Q08AH1 577 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 YIF1BQ5BJH7 314 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 CYB5R2Q6BCY4 276 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 ZNF573Q86YE8 665 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 PARP16Q8N5Y8 322 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 OR10Z1Q8NGY1 313 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 OPALINQ96PE5 141 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 NKX3-1Q99801 234 aaPredicted RBP12.05□□□□□ -0.48
HLA-F-229ENST00000489502 TMED9Q9BVK6 235 aa12.05□□□□□ -0.48
HLA-F-229ENST00000489502 ZCCHC4Q9H5U6 513 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms