RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 TRAV20A0A0B4J274 112 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 TMEM127O75204 238 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 CT62P0C5K7 136 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 BMP5P22003 454 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 MRGPRX3Q96LB0 322 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 FZR1Q9UM11 496 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 ALG1L2C9J202 215 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 PRRG2O14669 202 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 SPINK4O60575 86 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 SRFP11831 508 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 SPINK9Q5DT21 86 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 OR5M9Q8NGP3 310 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 TMEM37Q8WXS4 190 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 PLA2G2FQ9BZM2 168 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 TRAPPC1Q9Y5R8 145 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 SPRY3O43610 288 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 HMGA2P52926 109 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 APOBEC3DQ96AK3 386 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-209ENST00000489180 SARAFQ96BY9 339 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 CNTD2Q9H8S5 307 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 CEACAM6P40199 344 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 PTGFRP43088 359 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 ZNF774Q6NX45 483 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 KMT5CQ86Y97 462 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 OR10D4PQ8NGN7 298 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 CXorf58Q96LI9 332 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 LRFN3Q9BTN0 628 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 SLC17A5Q9NRA2 495 aa15.73■□□□□ 0.11
NPHP4-209ENST00000489180 IGHV5-51A0A0C4DH38 117 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 SMIM21Q3B7S5 101 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 TTC3P53804 2025 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 FAM24AA6NFZ4 105 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 CDC14BO60729 498 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 OR1L3Q8NH93 324 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 SIRT3Q9NTG7 399 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-209ENST00000489180 PPIL1Q9Y3C6 166 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 TIMM9Q9Y5J7 89 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 RAB5AP20339 215 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 PPP1CAP62136 330 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 SRSF5Q13243 272 aaKnown RBP15.72■□□□□ 0.11
NPHP4-209ENST00000489180 RAB35Q15286 201 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 MOGAT2Q3SYC2 334 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 FAM24BQ8N5W8 94 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 OR5C1Q8NGR4 320 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 MOGAT1Q96PD6 335 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 RAB18Q9NP72 206 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 MPC2O95563 127 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 KCNJ3P48549 501 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 PPP1CBP62140 327 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 C9orf50Q5SZB4 431 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 MARVELD1Q9BSK0 173 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 ERRFI1Q9UJM3 462 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-209ENST00000489180 LILRA5A6NI73 299 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 M0R1X1 148 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 SPINK2P20155 84 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 GNB2P62879 340 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 PJVKQ0ZLH3 352 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 FFAR4Q5NUL3 377 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 MCHR2Q969V1 340 aa15.72■□□□□ 0.11
NPHP4-209ENST00000489180 CCL2P13500 99 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 RGS7BPQ6MZT1 257 aaPredicted RBP15.71■□□□□ 0.11
NPHP4-209ENST00000489180 ZNF66Q6ZN08 573 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 ST6GAL2Q96JF0 529 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 ADAT1Q9BUB4 502 aaKnown RBP15.71■□□□□ 0.11
NPHP4-209ENST00000489180 KIAA1551Q9HCM1 1747 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 CDK5RAP2Q96SN8 1893 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 LMO7DNF2Z398 122 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 TBX19O60806 448 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 GGNBP1Q5YKI7 109 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 CBLN3Q6UW01 205 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 EDARADDQ8WWZ3 215 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 OR5H15A6NDH6 313 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 RRP8O43159 456 aaKnown RBP15.71■□□□□ 0.11
NPHP4-209ENST00000489180 GALP22466 123 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 GNG10P50151 68 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
NPHP4-209ENST00000489180 NOVA1P51513 510 aaKnown RBP15.71■□□□□ 0.11
NPHP4-209ENST00000489180 TPPP2P59282 170 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 ETFDHQ16134 617 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 PARD6AQ9NPB6 346 aa15.71■□□□□ 0.11
NPHP4-209ENST00000489180 A0A1W2PNV4 684 aa15.71■□□□□ 0.1
NPHP4-209ENST00000489180 ANKRD20A5PA0PJZ0 165 aa15.71■□□□□ 0.1
NPHP4-209ENST00000489180 SHISA7A6NL88 538 aa15.71■□□□□ 0.1
NPHP4-209ENST00000489180 SPICQ8N5J4 248 aa15.71■□□□□ 0.1
NPHP4-209ENST00000489180 OR4D11Q8NGI4 311 aa15.71■□□□□ 0.1
NPHP4-209ENST00000489180 TMEM230Q96A57 120 aa15.71■□□□□ 0.1
NPHP4-209ENST00000489180 OR2A5Q96R48 311 aa15.71■□□□□ 0.1
NPHP4-209ENST00000489180 RPP25Q9BUL9 199 aaKnown RBP15.71■□□□□ 0.1
NPHP4-209ENST00000489180 V9GYH0 126 aa15.71■□□□□ 0.1
NPHP4-209ENST00000489180 METTL12A8MUP2 240 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 OR2J3O76001 311 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 CELA2BP08218 269 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-209ENST00000489180 CA6P23280 308 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 FUT7Q11130 342 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 ABI3BPQ7Z7G0 1075 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 ALG14Q96F25 216 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 TECTBQ96PL2 329 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 ARRDC1-AS1Q9H2J1 176 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 MYH14Q7Z406 1995 aaKnown RBP15.7■□□□□ 0.1
NPHP4-209ENST00000489180 C3orf85A0A1B0GTC6 90 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms