RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 GAFA1Q96PS6 74 aa20.64■□□□□ 0.89
HMGN1-217ENST00000489072 METTL15A6NJ78 407 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 HAX1O00165 279 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 METTL11BQ5VVY1 283 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 ZNF788Q6ZQV5 615 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 CATSPERDQ86XM0 798 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 CBR4Q8N4T8 237 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 LY6G5BQ8NDX9 201 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 RFKQ969G6 155 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 DNTTIP1Q9H147 329 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 GPR173Q9NS66 373 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 IMPAD1Q9NX62 359 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 NLKQ9UBE8 527 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 ORC6Q9Y5N6 252 aa20.63■□□□□ 0.89
HMGN1-217ENST00000489072 CENPVL3A0A0U1RRI6 287 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 A6NIN4 97 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 NDUFB3O43676 98 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 ENTPD6O75354 484 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 CCL1P22362 96 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 GLRA1P23415 457 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 CFPP27918 469 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 ATP6V1E1P36543 226 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 ZNF85Q03923 595 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 SLC9A3R2Q15599 337 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 ODF4Q2M2E3 257 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 DEFB112Q30KQ8 113 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 CLVS2Q5SYC1 327 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 HAGHLQ6PII5 290 aaPredicted RBP20.62■□□□□ 0.89
HMGN1-217ENST00000489072 TRUB1Q8WWH5 349 aaKnown RBP20.62■□□□□ 0.89
HMGN1-217ENST00000489072 RORBQ92753 470 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 CNTD2Q9H8S5 307 aa20.62■□□□□ 0.89
HMGN1-217ENST00000489072 OR2AT4A6NND4 320 aa20.61■□□□□ 0.89
HMGN1-217ENST00000489072 SULT1C4O75897 302 aa20.61■□□□□ 0.89
HMGN1-217ENST00000489072 DGUOKQ16854 277 aa20.61■□□□□ 0.89
HMGN1-217ENST00000489072 MBOAT4Q96T53 435 aa20.61■□□□□ 0.89
HMGN1-217ENST00000489072 PRDM13Q9H4Q3 707 aa20.61■□□□□ 0.89
HMGN1-217ENST00000489072 ZMAT3Q9HA38 289 aaKnown RBP20.61■□□□□ 0.89
HMGN1-217ENST00000489072 IGKV1D-17A0A075B6S4 117 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 NKX6-3A6NJ46 265 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 EBAG9O00559 213 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 DLGAP1O14490 977 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 SIGLEC5O15389 551 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 BPIFB3P59826 476 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 ISL1P61371 349 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 SNRPGP62308 76 aaKnown RBP20.6■□□□□ 0.89
HMGN1-217ENST00000489072 TP53I3Q53FA7 332 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 LRRC10Q5BKY1 277 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 SLC25A30Q5SVS4 291 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 ZNF671Q8TAW3 534 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 RNF166Q96A37 237 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-217ENST00000489072 ZNF488Q96MN9 340 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 DCTN5Q9BTE1 182 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 AASSQ9UDR5 926 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 ZNF222Q9UK12 451 aa20.6■□□□□ 0.89
HMGN1-217ENST00000489072 PQLC2LA1A4F0 135 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 DHRS7CA6NNS2 312 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 H3BSH0 61 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 CLDN34H7C241 214 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 GPR37O15354 613 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 SYNGR1O43759 233 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 RNASE1P07998 156 aaKnown RBP20.59■□□□□ 0.89
HMGN1-217ENST00000489072 ACAA1P09110 424 aaPredicted RBP20.59■□□□□ 0.89
HMGN1-217ENST00000489072 PSG2P11465 335 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 IL13RA1P78552 427 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 PDCD1Q15116 288 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 CDONQ4KMG0 1287 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 PRSS35Q8N3Z0 413 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 LHX4Q969G2 390 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 TMIGD2Q96BF3 282 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 MED30Q96HR3 178 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 SLC29A1Q99808 456 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 S100A14Q9HCY8 104 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 ACOXLQ9NUZ1 547 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 ONECUT1Q9UBC0 465 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.59■□□□□ 0.89
HMGN1-217ENST00000489072 KPTNQ9Y664 436 aa20.59■□□□□ 0.89
HMGN1-217ENST00000489072 J3QRE1 110 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 HKR1P10072 659 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 KIR3DL2P43630 455 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 HAAOP46952 286 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 GABRA2P47869 451 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 OCLNQ16625 522 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 AWAT1Q58HT5 328 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 POC1AQ8NBT0 407 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 C8orf46Q8TAG6 207 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 H1FXQ92522 213 aaKnown RBP20.58■□□□□ 0.89
HMGN1-217ENST00000489072 RNFT2Q96EX2 444 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 SLC25A10Q9UBX3 287 aaPredicted RBP20.58■□□□□ 0.89
HMGN1-217ENST00000489072 GNG8Q9UK08 70 aa20.58■□□□□ 0.89
HMGN1-217ENST00000489072 IGHV1-69DA0A0B4J2H0 117 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 A0A1B0GVI7 797 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 J3QT63 122 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 HOXA3O43365 443 aaPredicted RBP20.57■□□□□ 0.88
HMGN1-217ENST00000489072 IGHV1-69P01742 117 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 ACP7Q6ZNF0 438 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 VMO1Q7Z5L0 202 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 ZNF573Q86YE8 665 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 C10orf67Q8IYJ2 551 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 GATAD2BQ8WXI9 593 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 SLC25A28Q96A46 364 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms