RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 LINC00477Q96M19 166 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 PDCD1LG2Q9BQ51 273 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 COA1Q9GZY4 146 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 CHRNA10Q9GZZ6 450 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 OR52A5Q9H2C5 316 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 PRORYQ9H606 182 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 ZNF442Q9H7R0 627 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 EXOSC4Q9NPD3 245 aaKnown RBP1.79□□□□□ -2.12
RFC4-213ENST00000489028 HEBP1Q9NRV9 189 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 ZNF355PQ9NSJ1 428 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 RMND1Q9NWS8 449 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 RHBDL2Q9NX52 303 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 ENOPH1Q9UHY7 261 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 SIGLEC7Q9Y286 467 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 TMEM94Q12767 1356 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 PLA2R1Q13018 1463 aa1.79□□□□□ -2.12
RFC4-213ENST00000489028 COL27A1Q8IZC6 1860 aaPredicted RBP1.79□□□□□ -2.12
RFC4-213ENST00000489028 NPHP4O75161 1426 aaPredicted RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 MAP3K19Q56UN5 1328 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TRAV8-6A0A0B4J262 113 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 IGHV7-4-1A0A0J9YVY3 117 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 J3QT63 122 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 K7EN84 100 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 SOCS1O15524 211 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 RBFOX2O43251 390 aaKnown RBP eCLIP1.78□□□□□ -2.12
RFC4-213ENST00000489028 FADS2O95864 444 aaKnown RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 LIPCP11150 499 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 PSMB5P28074 263 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 PRSS3P35030 304 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 POLR2IP36954 125 aaKnown RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 GALR1P47211 349 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 OR12D2P58182 307 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TAS2R31P59538 309 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TSPAN5P62079 268 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 C2orf80Q0P641 193 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 LAMTOR4Q0VGL1 99 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TRDNQ13061 729 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 XRCC4Q13426 336 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TOMM34Q15785 309 aaPredicted RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 C6orf99Q4VX62 202 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 YIF1BQ5BJH7 314 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 ACTL10Q5JWF8 245 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TMEM236Q5W0B7 351 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 ERICH5Q6P6B1 374 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 NTM-AS1Q6ZSK4 140 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 BHLHA15Q7RTS1 189 aaPredicted RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 WDR86Q86TI4 376 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 SETD3Q86TU7 594 aaPredicted RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 KRTAP13-1Q8IUC0 172 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 NELFCDQ8IXH7 590 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 LGI3Q8N145 548 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 C17orf78Q8N4C9 275 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 OR6N1Q8NGY5 312 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 OR51Q1Q8NH59 317 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 SFXN5Q8TD22 340 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 ADTRPQ96IZ2 230 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 KCNS1Q96KK3 526 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 ZNF396Q96N95 335 aaPredicted RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 RNF157Q96PX1 679 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 ALS2CR12Q96Q35 445 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 OR2M4Q96R27 311 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 OR4K3Q96R72 315 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 VAT1Q99536 393 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 RBBP8Q99708 897 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TBL1YQ9BQ87 522 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 ACBD6Q9BR61 282 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TIMM29Q9BSF4 260 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 GGTLC1Q9BX51 225 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 FGF23Q9GZV9 251 aaPredicted RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 SLC38A10Q9HBR0 1119 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 ACOT13Q9NPJ3 140 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 RBFOX1Q9NWB1 397 aaKnown RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 CD300AQ9UGN4 299 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 CLEC2DQ9UHP7 191 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 VAX2Q9UIW0 290 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TFR2Q9UP52 801 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 ORC6Q9Y5N6 252 aa1.78□□□□□ -2.12
RFC4-213ENST00000489028 TSSC4Q9Y5U2 329 aaPredicted RBP1.78□□□□□ -2.12
RFC4-213ENST00000489028 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 GPATCH8Q9UKJ3 1502 aaKnown RBP1.77□□□□□ -2.13
RFC4-213ENST00000489028 SLC5A10A0PJK1 596 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 GOLGA8IPA6NC78 632 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 OR5H1A6NKK0 313 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 CENPBD1B2RD01 187 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 RNASEK-C17orf49H0YIS7 233 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 H0YJW9 148 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 hCG_2039718K7EN88 272 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 M0R1X1 148 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 CETN3O15182 167 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 ENSAO43768 121 aaKnown RBP1.77□□□□□ -2.13
RFC4-213ENST00000489028 PLIN3O60664 434 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 SERPINB7O75635 380 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 YEATS4O95619 227 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 LDOC1O95751 146 aaPredicted RBP1.77□□□□□ -2.13
RFC4-213ENST00000489028 ADRA2AP08913 450 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 GIMD1P0DJR0 217 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 IL1RNP18510 177 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 ME2P23368 584 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 IL12BP29460 328 aa1.77□□□□□ -2.13
RFC4-213ENST00000489028 P2RY2P41231 377 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms