RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 CD80P33681 288 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 DVL1P1P54792 670 aaPredicted RBP15.59■□□□□ 0.09
PTCD3-217ENST00000488801 DMKNQ6E0U4 476 aaPredicted RBP15.59■□□□□ 0.09
PTCD3-217ENST00000488801 FAM166AQ6J272 317 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 DCDC5Q6ZRR9 648 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 FAM90A1Q86YD7 464 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 STX19Q8N4C7 294 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 ZNF676Q8N7Q3 588 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 NANOGP1Q8N7R0 232 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 OR5AK2Q8NH90 309 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 AQP3Q92482 292 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 PGLYRP3Q96LB9 341 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 HIST1H2AAQ96QV6 131 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 TRIM36Q9NQ86 728 aa15.59■□□□□ 0.09
PTCD3-217ENST00000488801 IGKV1-9A0A0C4DH69 117 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 TRBV2A0A0J9YWF9 115 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 hCG_1807616A0A1W2PRN6 198 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 OOEPA6NGQ2 149 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 A8MV72 311 aaPredicted RBP15.58■□□□□ 0.08
PTCD3-217ENST00000488801 INAFM1C9JVW0 142 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 RHBDL1O75783 438 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 GATBO75879 557 aaKnown RBP15.58■□□□□ 0.08
PTCD3-217ENST00000488801 WNT2P09544 360 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 WNT4P56705 351 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 SEC61A1P61619 476 aaKnown RBP15.58■□□□□ 0.08
PTCD3-217ENST00000488801 C19orf18Q8NEA5 215 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 GATAD2BQ8WXI9 593 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 COMMD4Q9H0A8 199 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 CHCHD3Q9NX63 227 aaKnown RBP15.58■□□□□ 0.08
PTCD3-217ENST00000488801 UBAP1Q9NZ09 502 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 ERVK-18Q9QC07 812 aa15.58■□□□□ 0.08
PTCD3-217ENST00000488801 JMJD1CQ15652 2540 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 IGKV1-27A0A075B6S5 117 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 DENRO43583 198 aaKnown RBP15.57■□□□□ 0.08
PTCD3-217ENST00000488801 ALX3O95076 343 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 TGFAP01135 160 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 ACSM1Q08AH1 577 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 ASPHD2Q6ICH7 369 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 ZNF529Q6P280 563 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 CRIP3Q6Q6R5 217 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 KCTD8Q6ZWB6 473 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 PARP16Q8N5Y8 322 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 DNAAF1Q8NEP3 725 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 OR51F2Q8NH61 342 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 MYDGFQ969H8 173 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 DACT3Q96B18 629 aaPredicted RBP15.57■□□□□ 0.08
PTCD3-217ENST00000488801 C12orf43Q96C57 262 aaKnown RBP15.57■□□□□ 0.08
PTCD3-217ENST00000488801 CNBD2Q96M20 576 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 YAE1D1Q9NRH1 226 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 SCN3BQ9NY72 215 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 CTSZQ9UBR2 303 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 MIOXQ9UGB7 285 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 LRCH1Q9Y2L9 728 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 TPRKBQ9Y3C4 175 aa15.57■□□□□ 0.08
PTCD3-217ENST00000488801 TRAV38-1A0A0B4J264 116 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 PPIAL4CA0A0B4J2A2 164 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 J3QT63 122 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 MYL12BO14950 172 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 PLPP2O43688 288 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 NOS1APO75052 506 aaPredicted RBP15.56■□□□□ 0.08
PTCD3-217ENST00000488801 FCN3O75636 299 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 MT-ND2P03891 347 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 CD1AP06126 327 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 MUC1P15941 1255 aaPredicted RBP15.56■□□□□ 0.08
PTCD3-217ENST00000488801 ZFP36P26651 326 aaKnown RBP15.56■□□□□ 0.08
PTCD3-217ENST00000488801 TAS2R43P59537 309 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 RPS11P62280 158 aaKnown RBP eCLIP15.56■□□□□ 0.08
PTCD3-217ENST00000488801 BDH1Q02338 343 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 SFRP4Q6FHJ7 346 aaPredicted RBP15.56■□□□□ 0.08
PTCD3-217ENST00000488801 HAGHLQ6PII5 290 aaPredicted RBP15.56■□□□□ 0.08
PTCD3-217ENST00000488801 LYPD2Q6UXB3 125 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 ZNF841Q6ZN19 808 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 CALHM1Q8IU99 346 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 OR13C3Q8NGS6 347 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 TMEM186Q96B77 213 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 FGGYQ96C11 551 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 PKIBQ9C010 78 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 KAAG1Q9UBP8 84 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 KCNS2Q9ULS6 477 aa15.56■□□□□ 0.08
PTCD3-217ENST00000488801 TRAV20A0A0B4J274 112 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 TRBV5-5A0A0J9YX44 114 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 C3orf80F5H4A9 247 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 SYNGR1O43759 233 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 ACAA1P09110 424 aaPredicted RBP15.55■□□□□ 0.08
PTCD3-217ENST00000488801 PGA5P0DJD9 388 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 RPS2P15880 293 aaKnown RBP15.55■□□□□ 0.08
PTCD3-217ENST00000488801 ATF1P18846 271 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 HAAOP46952 286 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 FUT6P51993 359 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 PAX2Q02962 417 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 CNN3Q15417 329 aaKnown RBP15.55■□□□□ 0.08
PTCD3-217ENST00000488801 KCNJ8Q15842 424 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 RBM48Q5RL73 367 aaKnown RBP15.55■□□□□ 0.08
PTCD3-217ENST00000488801 STUMQ69YW2 141 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 GLCCI1Q86VQ1 547 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 ZNF573Q86YE8 665 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 POC1AQ8NBT0 407 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 SEH1LQ96EE3 360 aa15.55■□□□□ 0.08
PTCD3-217ENST00000488801 NEIL1Q96FI4 390 aaPredicted RBP15.55■□□□□ 0.08
PTCD3-217ENST00000488801 MND1Q9BWT6 205 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms