RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ZNF649Q9BS31 505 aa12.59□□□□□ -0.39
CXCL12-207ENST00000488591 FGF23Q9GZV9 251 aaPredicted RBP12.59□□□□□ -0.39
CXCL12-207ENST00000488591 PLCXD1Q9NUJ7 323 aa12.59□□□□□ -0.39
CXCL12-207ENST00000488591 ERVK-18Q9QC07 812 aa12.59□□□□□ -0.39
CXCL12-207ENST00000488591 DNAJB11Q9UBS4 358 aa12.59□□□□□ -0.39
CXCL12-207ENST00000488591 CLN8Q9UBY8 286 aa12.59□□□□□ -0.39
CXCL12-207ENST00000488591 OR5V1Q9UGF6 321 aa12.59□□□□□ -0.39
CXCL12-207ENST00000488591 PPIAL4CA0A0B4J2A2 164 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 TRBV2A0A0J9YWF9 115 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 TMEM212A6NML5 194 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 OR4C45A6NMZ5 311 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 A8MXK9 166 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 SRRM5B3KS81 715 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 ADAM20O43506 726 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 ATP6V1G2O95670 118 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 IFNA2P01563 188 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 FAM157CP0CG43 387 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 EGR1P18146 543 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 SRD5A1P18405 259 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 ZFP36P26651 326 aaKnown RBP12.58□□□□□ -0.4
CXCL12-207ENST00000488591 SRP14P37108 136 aaKnown RBP12.58□□□□□ -0.4
CXCL12-207ENST00000488591 TGM4P49221 684 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 NPY4RP50391 375 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 SEC61A1P61619 476 aaKnown RBP12.58□□□□□ -0.4
CXCL12-207ENST00000488591 ST3GAL4Q11206 333 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 CNN3Q15417 329 aaKnown RBP12.58□□□□□ -0.4
CXCL12-207ENST00000488591 CCDC58Q4VC31 144 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 DMRTC1Q5HYR2 192 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 HAGHLQ6PII5 290 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-207ENST00000488591 LYPD2Q6UXB3 125 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 STX19Q8N4C7 294 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 BPIFB6Q8NFQ5 453 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 OR13C3Q8NGS6 347 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 OR5AK2Q8NH90 309 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 C12orf43Q96C57 262 aaKnown RBP12.58□□□□□ -0.4
CXCL12-207ENST00000488591 CHST5Q9GZS9 411 aa12.58□□□□□ -0.4
CXCL12-207ENST00000488591 POLR3KQ9Y2Y1 108 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-207ENST00000488591 IGHV3OR15-7A0A075B7D8 119 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 FAM230AA0A1W2PPH8 454 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 PQLC2LA1A4F0 135 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 E9PI62 339 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 PHF1O43189 567 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-207ENST00000488591 AKR7A2O43488 359 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 GYPAP02724 150 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 OCM2P0CE71 109 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 OCMP0CE72 109 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-207ENST00000488591 HAAOP46952 286 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 FUT6P51993 359 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 GMFBP60983 142 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 HOXA4Q00056 320 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-207ENST00000488591 RPL22L1Q6P5R6 122 aaKnown RBP12.57□□□□□ -0.4
CXCL12-207ENST00000488591 IL17RELQ6ZVW7 336 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 FAM90A1Q86YD7 464 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 AQP3Q92482 292 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 FGGYQ96C11 551 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 C7orf69Q9H7B7 122 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 BABAM2Q9NXR7 383 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 SCN3BQ9NY72 215 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 RASL12Q9NYN1 266 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 PSORS1C1Q9UIG5 152 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 POLDIP2Q9Y2S7 368 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 ZFHX3Q15911 3703 aa12.57□□□□□ -0.4
CXCL12-207ENST00000488591 J3QT63 122 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 TMPRSS2O15393 492 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 XPNPEP2O43895 674 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 RHBDL1O75783 438 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 ZFPL1O95159 310 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 GLRA1P23415 457 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 UBE2V2Q15819 145 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 OR2G6Q5TZ20 316 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 CD276Q5ZPR3 534 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 WDR25Q64LD2 544 aaPredicted RBP12.56□□□□□ -0.4
CXCL12-207ENST00000488591 BTNL3Q6UXE8 466 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 IZUMO2Q6UXV1 221 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 AHSA2Q719I0 299 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 SLC36A1Q7Z2H8 476 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 OR52N1Q8NH53 320 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 TRMT10AQ8TBZ6 339 aaKnown RBP12.56□□□□□ -0.4
CXCL12-207ENST00000488591 GATAD2BQ8WXI9 593 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 TMIGD2Q96BF3 282 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 BORCS8Q96FH0 119 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 NEK6Q9HC98 313 aa12.56□□□□□ -0.4
CXCL12-207ENST00000488591 NKX6-3A6NJ46 265 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 KIAA1324LA8MWY0 1029 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-207ENST00000488591 TRAPPC2LH3BP13 241 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 TNFRSF13BO14836 293 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-207ENST00000488591 PRKACBP22694 351 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 GTF2A1P52655 376 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-207ENST00000488591 ATP1B3P54709 279 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 SCGB2A2Q13296 93 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 C6orf141Q5SZD1 244 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 LAIR2Q6ISS4 152 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 UTS2BQ765I0 119 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 DNAAF1Q8NEP3 725 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 NPRL2Q8WTW4 380 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 TSEN15Q8WW01 171 aaKnown RBP12.55□□□□□ -0.4
CXCL12-207ENST00000488591 RAB40AQ8WXH6 277 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 MYDGFQ969H8 173 aa12.55□□□□□ -0.4
CXCL12-207ENST00000488591 ADAT3Q96EY9 351 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-207ENST00000488591 PDCD1LG2Q9BQ51 273 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms