RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 LPCAT4Q643R3 524 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 USP43Q70EL4 1123 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 MOB3CQ70IA8 216 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 DOK3Q7L591 496 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 THAP5Q7Z6K1 395 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 ACBD7Q8N6N7 88 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 ZNF555Q8NEP9 628 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 ANGPTL6Q8NI99 470 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 HIST1H2AAQ96QV6 131 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 CCL13Q99616 98 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 AMBNQ9NP70 447 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 SMPD3Q9NY59 655 aaPredicted RBP11.77□□□□□ -0.53
COL9A2-208ENST00000488463 FRRS1LQ9P0K9 344 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 ERVK-18Q9QC07 812 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 GNG8Q9UK08 70 aa11.77□□□□□ -0.53
COL9A2-208ENST00000488463 H0YJX3 145 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 MPZL2O60487 215 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 TFF1P04155 84 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 IGHV4-38-2P0DP08 117 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 MMP9P14780 707 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 PEX2P28328 305 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 HSPA13P48723 471 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 HILS1P60008 231 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 SMN1Q16637 294 aaKnown RBP11.76□□□□□ -0.53
COL9A2-208ENST00000488463 ODF4Q2M2E3 257 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 PLCXD3Q63HM9 321 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 ZNF788Q6ZQV5 615 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 KCTD8Q6ZWB6 473 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 KCTD20Q7Z5Y7 419 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 RDH10Q8IZV5 341 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 FAM216BQ8N7L0 139 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 OR5T2Q8NGG2 359 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 PELI1Q96FA3 418 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 TECTBQ96PL2 329 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 SLC6A7Q99884 636 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 MRI1Q9BV20 369 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 OCEL1Q9H607 264 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 ESM1Q9NQ30 184 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 GPR173Q9NS66 373 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 ZNF69Q9UC07 566 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 ZNF222Q9UK12 451 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 PKD1L1Q8TDX9 2849 aa11.76□□□□□ -0.53
COL9A2-208ENST00000488463 IGKV1D-17A0A075B6S4 117 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 IGKV1-27A0A075B6S5 117 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 LOC107986453A0A1B0GWG9 222 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 DAPL1A0PJW8 107 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 OR4C45A6NMZ5 311 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 H3BSH0 61 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 TMPRSS2O15393 492 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 SYT7O43581 403 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 SYNGR1O43759 233 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 NOS1APO75052 506 aaPredicted RBP11.75□□□□□ -0.53
COL9A2-208ENST00000488463 CLIC3O95833 236 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 PLATP00750 562 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 SELLP14151 372 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 MPZP25189 248 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 GMFBP60983 142 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 ADARB1P78563 741 aaKnown RBP11.75□□□□□ -0.53
COL9A2-208ENST00000488463 GALEQ14376 348 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 UBE2V2Q15819 145 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 C11orf91Q3C1V1 193 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 ZNF691Q5VV52 312 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 HAGHLQ6PII5 290 aaPredicted RBP11.75□□□□□ -0.53
COL9A2-208ENST00000488463 BTNL3Q6UXE8 466 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 C9orf139Q6ZV77 190 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 EGFL6Q8IUX8 553 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 BCL6BQ8N143 479 aaPredicted RBP11.75□□□□□ -0.53
COL9A2-208ENST00000488463 LY6G5BQ8NDX9 201 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 C22orf15Q8WYQ4 148 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 Q96MT0 163 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 GAFA1Q96PS6 74 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 C19orf24Q9BVV8 132 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 ISG20L2Q9H9L3 353 aaKnown RBP11.75□□□□□ -0.53
COL9A2-208ENST00000488463 SNTG1Q9NSN8 517 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 NUP50Q9UKX7 468 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 PCDHGB1Q9Y5G3 927 aa11.75□□□□□ -0.53
COL9A2-208ENST00000488463 SOX21Q9Y651 276 aaPredicted RBP11.75□□□□□ -0.53
COL9A2-208ENST00000488463 A0A1B0GVI7 797 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 ANKRD61A6NGH8 418 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 SNTNA6NMZ2 147 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 ENSAO43768 121 aaKnown RBP11.74□□□□□ -0.53
COL9A2-208ENST00000488463 RGS9O75916 674 aaPredicted RBP11.74□□□□□ -0.53
COL9A2-208ENST00000488463 ISG15P05161 165 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 UBCP0CG48 685 aaKnown RBP11.74□□□□□ -0.53
COL9A2-208ENST00000488463 LIMS3P0CW19 117 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 LIMS4P0CW20 117 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 PGA5P0DJD9 388 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 CCR9P51686 369 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 FGF12P61328 243 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 ERVK11-1P61568 191 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 RAB40BQ12829 278 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 SCGB2A2Q13296 93 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 DGUOKQ16854 277 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 ARMCX4Q5H9R4 360 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 CD276Q5ZPR3 534 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 BTN2A1Q7KYR7 527 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 FAM220AQ7Z4H9 259 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 LHFPL3Q86UP9 236 aa11.74□□□□□ -0.53
COL9A2-208ENST00000488463 CALHM1Q8IU99 346 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms