RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 PTTG1O95997 202 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 CATP04040 527 aaKnown RBP0.94□□□□□ -2.26
SMC4-220ENST00000488017 UQCRHP07919 91 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 RPSAP08865 295 aaKnown RBP0.94□□□□□ -2.26
SMC4-220ENST00000488017 ZNF35P13682 527 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 HRES1P13985 223 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 GALP22466 123 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 IL3RAP26951 378 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 EVI2BP34910 448 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 GPR1P46091 355 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 HADHBP55084 474 aaKnown RBP0.94□□□□□ -2.26
SMC4-220ENST00000488017 OR2B8PP59922 312 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 MYL6P60660 151 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 ATP6V0D1P61421 351 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 INCA1Q0VD86 236 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 BTN1A1Q13410 526 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 IL18Q14116 193 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 BEX5Q5H9J7 111 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 TMEM69Q5SWH9 247 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 FAM131AQ6UXB0 335 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 APRG1Q8IVJ8 170 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 SLC30A8Q8IWU4 369 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 BBS7Q8IWZ6 715 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 KATNAL2Q8IYT4 538 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 MICU2Q8IYU8 434 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 KRT222Q8N1A0 295 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 PDCL2Q8N4E4 241 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 TRIML2Q8N7C3 387 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 SLC25A29Q8N8R3 303 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 ITFG1Q8TB96 612 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 LRRC45Q96CN5 670 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 FAM19A4Q96LR4 140 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 UBE2E2Q96LR5 201 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 C9orf72Q96LT7 481 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 RDH12Q96NR8 316 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 ALS2CR12Q96Q35 445 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 TEAD3Q99594 435 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 C1orf50Q9BV19 199 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 SFXN3Q9BWM7 321 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 MS4A8Q9BY19 250 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 REEP1Q9H902 201 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 CD209Q9NNX6 404 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 HEBP1Q9NRV9 189 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 INIPQ9NRY2 104 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 TREX1Q9NSU2 369 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 HMGXB4Q9UGU5 601 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 SAMHD1Q9Y3Z3 626 aaKnown RBP0.94□□□□□ -2.26
SMC4-220ENST00000488017 CPDO75976 1380 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 KDM5BQ9UGL1 1544 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 CTTNBP2Q8WZ74 1663 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 PHIPQ8WWQ0 1821 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 SPEF2Q9C093 1822 aa0.94□□□□□ -2.26
SMC4-220ENST00000488017 MYH9P35579 1960 aaKnown RBP0.94□□□□□ -2.26
SMC4-220ENST00000488017 MYH3P11055 1940 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 TCHHQ07283 1943 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 CASZ1Q86V15 1759 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 NLRP1Q9C000 1473 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 MAP3K19Q56UN5 1328 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 MROH5Q6ZUA9 1318 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 MYO3BQ8WXR4 1341 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 CHD1O14646 1710 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 DNMBPQ6XZF7 1577 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 A0A0B4J2E0 115 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 GOLGA6L7A0A1B0GV03 622 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 A0A1B0GVG6 124 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 SUPT3HB4E1H0 165 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 J3QRE1 110 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 PSPHP1O15172 72 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 PLXNB1O43157 2135 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 ZW10O43264 779 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 FSTL3O95633 263 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 MAS1P04201 325 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 FGF4P08620 206 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 MMP7P09237 267 aaPredicted RBP0.93□□□□□ -2.26
SMC4-220ENST00000488017 TACSTD2P09758 323 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 ANXA8P13928 327 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 CXCR1P25024 350 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 GNA13Q14344 377 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 IHHQ14623 411 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 TSC22D1Q15714 1073 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 KLHL40Q2TBA0 621 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 DEFB134Q4QY38 66 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 ZNF678Q5SXM1 525 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 ANXA8L1Q5VT79 327 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 STEAP4Q687X5 459 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 Q6ZS52 159 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 NT5DC3Q86UY8 548 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 CD302Q8IX05 232 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 TRAM1L1Q8N609 369 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 ZNF565Q8N9K5 539 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 INO80EQ8NBZ0 244 aaPredicted RBP0.93□□□□□ -2.26
SMC4-220ENST00000488017 OR52K2Q8NGK3 314 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 OR52N1Q8NH53 320 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.93□□□□□ -2.26
SMC4-220ENST00000488017 ISOC2Q96AB3 205 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 RCN3Q96D15 328 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 NAPGQ99747 312 aaPredicted RBP0.93□□□□□ -2.26
SMC4-220ENST00000488017 GABRG3Q99928 467 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 BCL7BQ9BQE9 202 aa0.93□□□□□ -2.26
SMC4-220ENST00000488017 LLPHQ9BRT6 129 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms