RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 ZFP3Q96NJ6 502 aa2.56□□□□□ -2
UBR3-211ENST00000487689 TIMM29Q9BSF4 260 aa2.56□□□□□ -2
UBR3-211ENST00000487689 RETNQ9HD89 108 aa2.56□□□□□ -2
UBR3-211ENST00000487689 ZDHHC4Q9NPG8 344 aa2.56□□□□□ -2
UBR3-211ENST00000487689 VAPAQ9P0L0 249 aa2.56□□□□□ -2
UBR3-211ENST00000487689 CLEC2DQ9UHP7 191 aa2.56□□□□□ -2
UBR3-211ENST00000487689 RCL1Q9Y2P8 373 aaKnown RBP2.56□□□□□ -2
UBR3-211ENST00000487689 TSSC4Q9Y5U2 329 aaPredicted RBP2.56□□□□□ -2
UBR3-211ENST00000487689 PLIN4Q96Q06 1357 aa2.56□□□□□ -2
UBR3-211ENST00000487689 GLYATL1P3A0A0U1RQE8 302 aa2.55□□□□□ -2
UBR3-211ENST00000487689 LOC100131303A0A0U1RQF7 123 aa2.55□□□□□ -2
UBR3-211ENST00000487689 A0A1B0GWB2 263 aa2.55□□□□□ -2
UBR3-211ENST00000487689 SMIM23A6NLE4 172 aa2.55□□□□□ -2
UBR3-211ENST00000487689 USP27XA6NNY8 438 aa2.55□□□□□ -2
UBR3-211ENST00000487689 A8MX80 341 aa2.55□□□□□ -2
UBR3-211ENST00000487689 C19orf84I3L1E1 186 aa2.55□□□□□ -2
UBR3-211ENST00000487689 DCTN6O00399 190 aa2.55□□□□□ -2
UBR3-211ENST00000487689 LAD1O00515 517 aa2.55□□□□□ -2
UBR3-211ENST00000487689 TOX3O15405 576 aaPredicted RBP2.55□□□□□ -2
UBR3-211ENST00000487689 SNAI2O43623 268 aa2.55□□□□□ -2
UBR3-211ENST00000487689 MGRN1O60291 552 aa2.55□□□□□ -2
UBR3-211ENST00000487689 CLDN11O75508 207 aa2.55□□□□□ -2
UBR3-211ENST00000487689 SC5DO75845 299 aa2.55□□□□□ -2
UBR3-211ENST00000487689 LSM8O95777 96 aaKnown RBP2.55□□□□□ -2
UBR3-211ENST00000487689 IGHV3-9P01782 118 aa2.55□□□□□ -2
UBR3-211ENST00000487689 IGHV2-5P01817 119 aa2.55□□□□□ -2
UBR3-211ENST00000487689 SERPINA5P05154 406 aa2.55□□□□□ -2
UBR3-211ENST00000487689 CT45A6P0DMU7 189 aa2.55□□□□□ -2
UBR3-211ENST00000487689 CT45A5P0DMU8 189 aa2.55□□□□□ -2
UBR3-211ENST00000487689 CT45A7P0DMV0 189 aa2.55□□□□□ -2
UBR3-211ENST00000487689 HSPD1P10809 573 aaKnown RBP2.55□□□□□ -2
UBR3-211ENST00000487689 PGAM2P15259 253 aa2.55□□□□□ -2
UBR3-211ENST00000487689 TBPP20226 339 aa2.55□□□□□ -2
UBR3-211ENST00000487689 HTR1EP28566 365 aa2.55□□□□□ -2
UBR3-211ENST00000487689 RFC3P40938 356 aa2.55□□□□□ -2
UBR3-211ENST00000487689 UGT2B15P54855 530 aa2.55□□□□□ -2
UBR3-211ENST00000487689 STXBP1P61764 594 aaKnown RBP2.55□□□□□ -2
UBR3-211ENST00000487689 SLC35B1P78383 322 aa2.55□□□□□ -2
UBR3-211ENST00000487689 PITPNAQ00169 270 aa2.55□□□□□ -2
UBR3-211ENST00000487689 SP4Q02446 784 aa2.55□□□□□ -2
UBR3-211ENST00000487689 KCNJ11Q14654 390 aa2.55□□□□□ -2
UBR3-211ENST00000487689 ARL6IP1Q15041 203 aa2.55□□□□□ -2
UBR3-211ENST00000487689 GABRA6Q16445 453 aa2.55□□□□□ -2
UBR3-211ENST00000487689 C5orf64Q2M2E5 130 aa2.55□□□□□ -2
UBR3-211ENST00000487689 PARP15Q460N3 678 aa2.55□□□□□ -2
UBR3-211ENST00000487689 CT45A1Q5HYN5 189 aa2.55□□□□□ -2
UBR3-211ENST00000487689 CDKL4Q5MAI5 379 aa2.55□□□□□ -2
UBR3-211ENST00000487689 OR2G6Q5TZ20 316 aa2.55□□□□□ -2
UBR3-211ENST00000487689 ANKRD26P1Q6NSI1 321 aa2.55□□□□□ -2
UBR3-211ENST00000487689 TRIM40Q6P9F5 258 aa2.55□□□□□ -2
UBR3-211ENST00000487689 MBOAT1Q6ZNC8 495 aa2.55□□□□□ -2
UBR3-211ENST00000487689 ABHD13Q7L211 337 aa2.55□□□□□ -2
UBR3-211ENST00000487689 TMEM135Q86UB9 458 aa2.55□□□□□ -2
UBR3-211ENST00000487689 UNC93AQ86WB7 457 aa2.55□□□□□ -2
UBR3-211ENST00000487689 ACOT4Q8N9L9 421 aa2.55□□□□□ -2
UBR3-211ENST00000487689 ZNRF1Q8ND25 227 aa2.55□□□□□ -2
UBR3-211ENST00000487689 ZNF738Q8NE65 137 aa2.55□□□□□ -2
UBR3-211ENST00000487689 OR2G2Q8NGZ5 317 aa2.55□□□□□ -2
UBR3-211ENST00000487689 CT45A3Q8NHU0 189 aa2.55□□□□□ -2
UBR3-211ENST00000487689 ZNF502Q8TBZ5 544 aa2.55□□□□□ -2
UBR3-211ENST00000487689 FANK1Q8TC84 345 aa2.55□□□□□ -2
UBR3-211ENST00000487689 VN1R17PQ8TDU5 208 aa2.55□□□□□ -2
UBR3-211ENST00000487689 ITLN2Q8WWU7 325 aaPredicted RBP2.55□□□□□ -2
UBR3-211ENST00000487689 BAALCQ8WXS3 180 aa2.55□□□□□ -2
UBR3-211ENST00000487689 TMEM131Q92545 1883 aa2.55□□□□□ -2
UBR3-211ENST00000487689 MS4A14Q96JA4 679 aa2.55□□□□□ -2
UBR3-211ENST00000487689 DNAJC1Q96KC8 554 aaKnown RBP2.55□□□□□ -2
UBR3-211ENST00000487689 SERPINB12Q96P63 405 aa2.55□□□□□ -2
UBR3-211ENST00000487689 MS4A4EQ96PG1 132 aa2.55□□□□□ -2
UBR3-211ENST00000487689 TBX15Q96SF7 602 aa2.55□□□□□ -2
UBR3-211ENST00000487689 NAT9Q9BTE0 207 aa2.55□□□□□ -2
UBR3-211ENST00000487689 HCAR1Q9BXC0 346 aa2.55□□□□□ -2
UBR3-211ENST00000487689 POTEKPQ9BYX7 375 aa2.55□□□□□ -2
UBR3-211ENST00000487689 WDR54Q9H977 334 aa2.55□□□□□ -2
UBR3-211ENST00000487689 AMBNQ9NP70 447 aa2.55□□□□□ -2
UBR3-211ENST00000487689 TREX1Q9NSU2 369 aa2.55□□□□□ -2
UBR3-211ENST00000487689 RMND1Q9NWS8 449 aa2.55□□□□□ -2
UBR3-211ENST00000487689 PAK1IP1Q9NWT1 392 aaPredicted RBP2.55□□□□□ -2
UBR3-211ENST00000487689 GIN1Q9NXP7 522 aa2.55□□□□□ -2
UBR3-211ENST00000487689 USE1Q9NZ43 259 aa2.55□□□□□ -2
UBR3-211ENST00000487689 SLC2A6Q9UGQ3 507 aa2.55□□□□□ -2
UBR3-211ENST00000487689 RIMS3Q9UJD0 308 aa2.55□□□□□ -2
UBR3-211ENST00000487689 NXT1Q9UKK6 140 aaKnown RBP2.55□□□□□ -2
UBR3-211ENST00000487689 ING4Q9UNL4 249 aa2.55□□□□□ -2
UBR3-211ENST00000487689 CCL26Q9Y258 94 aa2.55□□□□□ -2
UBR3-211ENST00000487689 GOLT1BQ9Y3E0 138 aa2.55□□□□□ -2
UBR3-211ENST00000487689 MYO5AQ9Y4I1 1855 aaKnown RBP2.55□□□□□ -2
UBR3-211ENST00000487689 U3KQA8 63 aa2.55□□□□□ -2
UBR3-211ENST00000487689 DOCK9Q9BZ29 2069 aa2.54□□□□□ -2
UBR3-211ENST00000487689 COL7A1Q02388 2944 aa2.54□□□□□ -2
UBR3-211ENST00000487689 GOLGA6L10A6NI86 522 aa2.54□□□□□ -2
UBR3-211ENST00000487689 SEC14L6B5MCN3 397 aa2.54□□□□□ -2
UBR3-211ENST00000487689 E9PLD3 99 aa2.54□□□□□ -2
UBR3-211ENST00000487689 PRAMEF26H0Y7S4 382 aa2.54□□□□□ -2
UBR3-211ENST00000487689 KLRC4-KLRK1H3BQV0 150 aa2.54□□□□□ -2
UBR3-211ENST00000487689 CLDN34H7C241 214 aa2.54□□□□□ -2
UBR3-211ENST00000487689 PLPP3O14495 311 aa2.54□□□□□ -2
UBR3-211ENST00000487689 MAGEB4O15481 346 aaPredicted RBP2.54□□□□□ -2
UBR3-211ENST00000487689 GATCO43716 136 aaKnown RBP2.54□□□□□ -2
UBR3-211ENST00000487689 ALOX12BO75342 701 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms