RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 AGPAT4Q9NRZ5 378 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 CLN8Q9UBY8 286 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 SPTAN1Q13813 2472 aaKnown RBP3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 KNTC1P50748 2209 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 LRRK2Q5S007 2527 aa3.15□□□□□ -1.91
PRPF38A-203ENST00000487160 USP9YO00507 2555 aaPredicted RBP3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 CELSR2Q9HCU4 2923 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 CACNA1DQ01668 2161 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 IGLV1-36A0A0B4J1U3 117 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 SCAMP2O15127 329 aaKnown RBP3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 TLX1NBP0CAT3 122 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 GGT1P19440 569 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 AZU1P20160 251 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 F2RP25116 425 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 CASQ1P31415 396 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 CEACAM3P40198 252 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 HERVK_113P61574 105 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 PGGHGQ32M88 737 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 THEM4Q5T1C6 240 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 AADACL4Q5VUY2 407 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 FAM92BQ6ZTR7 304 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 LINC01551Q86U37 167 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 OR9G4Q8NGQ1 327 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 C2orf15Q8WU43 125 aaKnown RBP3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 KIAA1143Q96AT1 154 aaPredicted RBP3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 EXOSC8Q96B26 276 aaKnown RBP3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 MICU1Q9BPX6 476 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 CHAC1Q9BUX1 264 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 UCK2Q9BZX2 261 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 ZYG11BQ9C0D3 744 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 ISYNA1Q9NPH2 558 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 UVRAGQ9P2Y5 699 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 KNL1Q8NG31 2342 aa3.14□□□□□ -1.91
PRPF38A-203ENST00000487160 ZNF106Q9H2Y7 1883 aaKnown RBP3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 AHCTF1Q8WYP5 2266 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 CENPEQ02224 2701 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 IGLV4-69A0A075B6H9 119 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 KCNE1BA0A087WTH5 132 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 IGHV3-74A0A0B4J1X5 117 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 IGHV3-66A0A0C4DH42 116 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 ANKRD63C9JTQ0 380 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 SLC9A3R1O14745 358 aaPredicted RBP3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 SPOPO43791 374 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 AIREO43918 545 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 DEXIO95424 95 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 LDOC1O95751 146 aaPredicted RBP3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 ARG1P05089 322 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 EIF4EP06730 217 aaKnown RBP3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 HOXC4P09017 264 aaPredicted RBP3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 UBTFL6P0CB48 400 aaPredicted RBP3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 CT45A6P0DMU7 189 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 CT45A5P0DMU8 189 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 CT45A7P0DMV0 189 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 SLC1A2P43004 574 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 CSNK1A1P48729 337 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 KRTAP12-2P59991 146 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 RAB11AP62491 216 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 RCAN2Q14206 197 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 RGNQ15493 299 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 RAB11BQ15907 218 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 ZBTB6Q15916 424 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 CT45A1Q5HYN5 189 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 GPR107Q5VW38 600 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 PLCXD3Q63HM9 321 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 C16orf87Q6PH81 154 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 ARL9Q6T311 187 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 PLET1Q6UQ28 207 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 SPESP1Q6UW49 350 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 Q6ZVH6 145 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 MICU2Q8IYU8 434 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 FAM86B1Q8N7N1 296 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 OR52E5Q8NH55 327 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 CT45A3Q8NHU0 189 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 ZNF414Q96IQ9 312 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 GABRG3Q99928 467 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 SLC17A9Q9BYT1 436 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 IQCGQ9H095 443 aaKnown RBP3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 BLZF1Q9H2G9 400 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 FBXO44Q9H4M3 255 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 LHX9Q9NQ69 397 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 MRPL22Q9NWU5 206 aaKnown RBP3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 KCNE3Q9Y6H6 103 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 CELSR1Q9NYQ6 3014 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 ICE1Q9Y2F5 2266 aa3.13□□□□□ -1.91
PRPF38A-203ENST00000487160 ITPR3Q14573 2671 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 IGLV3-16A0A075B6K0 115 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 IGHV5-51A0A0C4DH38 117 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 ZNF99A8MXY4 864 aaPredicted RBP3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 PIRO00625 290 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 SLC16A4O15374 487 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 HCRTO43612 131 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 NEMFO60524 1076 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 SPAG7O75391 227 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 FGFR1OPO95684 399 aaKnown RBP3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 CSTAP01040 98 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 CLTAP09496 248 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 ZNF823P16415 610 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 PPOXP50336 477 aa3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 RPL10AP62906 217 aaKnown RBP3.12□□□□□ -1.91
PRPF38A-203ENST00000487160 ERCC8Q13216 396 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms