RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 OR2G6Q5TZ20 316 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 TEX36Q5VZQ5 186 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 LAIR2Q6ISS4 152 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 LHFPL2Q6ZUX7 228 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 SERPINA12Q8IW75 414 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 GCSAMQ8N6F7 178 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 SCCPDHQ8NBX0 429 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 OR4M2Q8NGB6 313 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 RPS4Y2Q8TD47 263 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 TMEM186Q96B77 213 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 BORCS8Q96FH0 119 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 CDCA4Q9BXL8 241 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 PKIBQ9C010 78 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 DNTTIP1Q9H147 329 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 OR51I2Q9H344 312 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 TMEM165Q9HC07 324 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 GPR173Q9NS66 373 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 OR5V1Q9UGF6 321 aa12.28□□□□□ -0.44
LIMS3-205ENST00000487150 MTORP42345 2549 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 NKX6-3A6NJ46 265 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 A8MXK9 166 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 PTGES3LE9PB15 166 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 J3QLI3 93 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 WNT9BO14905 357 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 CYB5AP00167 134 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 HAAOP46952 286 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 RBP2P50120 134 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 RIPPLY3P57055 190 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 SLC35A2P78381 396 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 SMIM21Q3B7S5 101 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 YIF1BQ5BJH7 314 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 HAGHLQ6PII5 290 aaPredicted RBP12.27□□□□□ -0.45
LIMS3-205ENST00000487150 ZNF826PQ6ZT77 177 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 SLC36A1Q7Z2H8 476 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 FAM90A1Q86YD7 464 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 RDH10Q8IZV5 341 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 BOLLQ8N9W6 283 aaKnown RBP12.27□□□□□ -0.45
LIMS3-205ENST00000487150 RPL3LQ92901 407 aaKnown RBP12.27□□□□□ -0.45
LIMS3-205ENST00000487150 TMEM246Q9BRR3 403 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 SSBP3Q9BWW4 388 aaPredicted RBP12.27□□□□□ -0.45
LIMS3-205ENST00000487150 RASL12Q9NYN1 266 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 ZNF281Q9Y2X9 895 aa12.27□□□□□ -0.45
LIMS3-205ENST00000487150 CSPG4Q6UVK1 2322 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 E9PI62 339 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 OGG1O15527 345 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 RGS10O43665 173 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 ALX3O95076 343 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 MT-ND2P03891 347 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 CD1AP06126 327 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 CRHBPP24387 322 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 MPZP25189 248 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 C21orf33P30042 268 aaPredicted RBP12.26□□□□□ -0.45
LIMS3-205ENST00000487150 CD80P33681 288 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 PITPNBP48739 271 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 ATP1B3P54709 279 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 GNB2P62879 340 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 PPP3R1P63098 170 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 IL24Q13007 206 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 Q8IYB0 196 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 PARP16Q8N5Y8 322 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 GATAD2BQ8WXI9 593 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 AQP3Q92482 292 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 FGGYQ96C11 551 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 ADAT3Q96EY9 351 aaPredicted RBP12.26□□□□□ -0.45
LIMS3-205ENST00000487150 PDCD1LG2Q9BQ51 273 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 SHARPINQ9H0F6 387 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 HIF1ANQ9NWT6 349 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 CKLFQ9UBR5 152 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 CLN8Q9UBY8 286 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 CLEC2DQ9UHP7 191 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 POLR3KQ9Y2Y1 108 aaPredicted RBP12.26□□□□□ -0.45
LIMS3-205ENST00000487150 TANC2Q9HCD6 1990 aa12.26□□□□□ -0.45
LIMS3-205ENST00000487150 FAM230AA0A1W2PPH8 454 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 FAM157AC9JC47 383 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 MAGEB3O15480 346 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 SULT1B1O43704 296 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 MRPS14O60783 128 aaKnown RBP12.25□□□□□ -0.45
LIMS3-205ENST00000487150 ACAA1P09110 424 aaPredicted RBP12.25□□□□□ -0.45
LIMS3-205ENST00000487150 WNT2P09544 360 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 ATF1P18846 271 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 GLRA1P23415 457 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 MAPK3P27361 379 aaPredicted RBP12.25□□□□□ -0.45
LIMS3-205ENST00000487150 ACSM1Q08AH1 577 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 CD276Q5ZPR3 534 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 DMKNQ6E0U4 476 aaPredicted RBP12.25□□□□□ -0.45
LIMS3-205ENST00000487150 FIP1L1Q6UN15 594 aaKnown RBP12.25□□□□□ -0.45
LIMS3-205ENST00000487150 Q71RC1 249 aaPredicted RBP12.25□□□□□ -0.45
LIMS3-205ENST00000487150 PRSS48Q7RTY5 328 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 C11orf53Q8IXP5 236 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 NANOGP1Q8N7R0 232 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 POC1AQ8NBT0 407 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 ZNF485Q8NCK3 441 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 DEFB108BQ8NET1 73 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 TMIGD2Q96BF3 282 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 OPALINQ96PE5 141 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 FGF23Q9GZV9 251 aaPredicted RBP12.25□□□□□ -0.45
LIMS3-205ENST00000487150 DUSP21Q9H596 190 aa12.25□□□□□ -0.45
LIMS3-205ENST00000487150 ZCCHC4Q9H5U6 513 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms