RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 ZNF429Q86V71 674 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 CPEB3Q8NE35 698 aaKnown RBP14.69□□□□□ -0.06
COL7A1-210ENST00000487017 GALMQ96C23 342 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 OGG1O15527 345 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 MYF5P13349 255 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 SLC25A30Q5SVS4 291 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 WFDC8Q8IUA0 241 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 SIGLECL1Q8N7X8 197 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 SARAFQ96BY9 339 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 PAPPA2Q9BXP8 1791 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 RER1O15258 196 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 OR7C2O60412 319 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 SLC25A4P12235 298 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 SELENOPP49908 381 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 UBE3DQ7Z6J8 389 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF586Q9NXT0 402 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 ARL2-SNX15V9GYD0 113 aa14.69□□□□□ -0.06
COL7A1-210ENST00000487017 CCDC187A0A096LP49 1063 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 CDC14BO60729 498 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 RFC3P40938 356 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 GPBAR1Q8TDU6 330 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 NQO2P16083 231 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF528Q3MIS6 628 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 SPEM1Q8N4L4 309 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 UBE2L5PA0A1B0GUS4 154 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 DUS4LO95620 317 aaKnown RBP14.68□□□□□ -0.06
COL7A1-210ENST00000487017 CRYAAP02489 173 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 ERHP84090 104 aaKnown RBP14.68□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF816Q0VGE8 651 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-210ENST00000487017 RAB32Q13637 225 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 C10orf111Q8N326 155 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 CLDN23Q96B33 292 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 ADGRG7Q96K78 797 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 MRM2Q9UI43 246 aaKnown RBP14.68□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF391Q9UJN7 358 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 SLC22A20A6NK97 555 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 PLPP3O14495 311 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 ONECUT2O95948 504 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 ALKBH6Q3KRA9 238 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF574Q6ZN55 896 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-210ENST00000487017 Q6ZS52 159 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 OR1L3Q8NH93 324 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 MRPS24Q96EL2 167 aaKnown RBP14.68□□□□□ -0.06
COL7A1-210ENST00000487017 COMMD5Q9GZQ3 224 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 CNTD2Q9H8S5 307 aa14.68□□□□□ -0.06
COL7A1-210ENST00000487017 ZNF320A2RRD8 509 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 LIMK1P53667 647 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 BPIFB3P59826 476 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 MOGAT1Q96PD6 335 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 KIF13BQ9NQT8 1826 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 IGHV5-51A0A0C4DH38 117 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 SEMG1P04279 462 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 FABP9Q0Z7S8 132 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 SMIM21Q3B7S5 101 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 MRM1Q6IN84 353 aaKnown RBP14.67□□□□□ -0.06
COL7A1-210ENST00000487017 TDHQ8IZJ6 230 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 PLA2G2FQ9BZM2 168 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 IFT22Q9H7X7 185 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 FOCADQ5VW36 1801 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 OR3A4PP47883 348 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 RPS16P62249 146 aaKnown RBP14.67□□□□□ -0.06
COL7A1-210ENST00000487017 PRSS54Q6PEW0 395 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 MCHR2Q969V1 340 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 IL2RAP01589 272 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 PGA3P0DJD8 388 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 CALCRP30988 508 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 DRD3P35462 400 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 TOLLIPQ9H0E2 274 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 RGS13O14921 159 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 TCAPO15273 167 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 PIAS2O75928 621 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 HOXC8P31273 242 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 PRR27Q6MZM9 219 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 OIT3Q8WWZ8 545 aa14.67□□□□□ -0.06
COL7A1-210ENST00000487017 CTLA4P16410 223 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 CTGFP29279 349 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 GZMMP51124 257 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 SLC37A1P57057 533 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 PWWP2BQ6NUJ5 590 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 TSEN54Q7Z6J9 526 aaKnown RBP14.66□□□□□ -0.06
COL7A1-210ENST00000487017 SMCHD1A6NHR9 2005 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 GPR37O15354 613 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 RAB5AP20339 215 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 MRGPREQ86SM8 312 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 GOLT1BQ9Y3E0 138 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 LINC01387J3KSC0 135 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 WISP3O95389 354 aaPredicted RBP14.66□□□□□ -0.06
COL7A1-210ENST00000487017 CBLN3Q6UW01 205 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 PIK3IP1Q96FE7 263 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 PCED1AQ9H1Q7 454 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 MTCH2Q9Y6C9 303 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 TRAV20A0A0B4J274 112 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 PRRG2O14669 202 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 OR2J3O76001 311 aa14.66□□□□□ -0.06
COL7A1-210ENST00000487017 CLEC9AQ6UXN8 241 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 C6orf201Q7Z4U5 140 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 ANKRD37Q7Z713 158 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 ZPBPQ9BS86 351 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 FAAP24Q9BTP7 215 aa14.65□□□□□ -0.06
COL7A1-210ENST00000487017 ZDHHC11Q9H8X9 412 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms