RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 MTCP1P56278 107 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 SNTB2Q13425 540 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 GK2Q14410 553 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 MEX3BQ6ZN04 569 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 RNF144BQ7Z419 303 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 ZNF554Q86TJ5 538 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 CDH24Q86UP0 819 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 ZNF610Q8N9Z0 462 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 CSNK2A3Q8NEV1 391 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 TNFAIP8L1Q8WVP5 186 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 BORCS8Q96FH0 119 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 C1orf147Q96MC9 270 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 URM1Q9BTM9 101 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 SCPEP1Q9HB40 452 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 OBP2BQ9NPH6 170 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 NPDC1Q9NQX5 325 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 COPZ2Q9P299 210 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 KLK11Q9UBX7 282 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 MTFP1Q9UDX5 166 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 SLC7A11Q9UPY5 501 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 STARD10Q9Y365 291 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 ANKRD20A5PA0PJZ0 165 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 MEIOCA2RUB1 952 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 RAB27BO00194 218 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 CDC14BO60729 498 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 CSF1P09603 554 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 PTHLHP12272 177 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 RBP2P50120 134 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 FUT6P51993 359 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 CRIP3Q6Q6R5 217 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 FTMTQ8N4E7 242 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 ACBD4Q8NC06 268 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 RELL2Q8NC24 303 aaPredicted RBP12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 UBASH3BQ8TF42 649 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 PIGCQ92535 297 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 CREB3L1Q96BA8 519 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 LRRC46Q96FV0 321 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 MS4A3Q96HJ5 214 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 GAL3ST1Q99999 423 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 SFXN3Q9BWM7 321 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 TMEM59Q9BXS4 323 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 EIF3KQ9UBQ5 218 aaKnown RBP12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 ING4Q9UNL4 249 aa12.57□□□□□ -0.4
POLR2J3-204ENST00000486319 NOTCH2Q04721 2471 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 ICMTO60725 284 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 MPIG6BO95866 241 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 CBR1P16152 277 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 BTCP35070 178 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 ATP1B3P54709 279 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 ACTBP60709 375 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 ACTG1P63261 375 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 PLA1AQ53H76 456 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 RSBN1Q5VWQ0 802 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 PLCXD3Q63HM9 321 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 MOB3CQ70IA8 216 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 CXorf67Q86X51 503 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 GPX8Q8TED1 209 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 CHAC2Q8WUX2 184 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 MARVELD1Q9BSK0 173 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 LPAR5Q9H1C0 372 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 OPN3Q9H1Y3 402 aaPredicted RBP12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 CDH20Q9HBT6 801 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 PTTG3PQ9NZH4 202 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 NPAP1Q9NZP6 1156 aa12.56□□□□□ -0.4
POLR2J3-204ENST00000486319 FAM230AA0A1W2PPH8 454 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 EEF1E1-BLOC1S5C9J1V9 151 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 CRTAPO75718 401 aaPredicted RBP12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 CST4P01036 141 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 NGFP01138 241 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 LPLP06858 475 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 IGFBP2P18065 325 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 FAUP35544 74 aaKnown RBP12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 WNT5AP41221 380 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 VEGFCP49767 419 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 ASCL1P50553 236 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 ZP1P60852 638 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 MOGAT2Q3SYC2 334 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 ZNF260Q3ZCT1 412 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 DMRTC1Q5HYR2 192 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 OLFML2AQ68BL7 652 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 STEAP2Q8NFT2 490 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 OR56B2PQ8NGI1 322 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 OR56B1Q8NGI3 324 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 OR5D18Q8NGL1 313 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 OR10R2Q8NGX6 335 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 NEURL2Q9BR09 285 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 HRASLSQ9HDD0 168 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 AMDHD2Q9Y303 409 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 NUBP2Q9Y5Y2 271 aa12.55□□□□□ -0.4
POLR2J3-204ENST00000486319 ZNF780AO75290 641 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 IGKV3-15P01624 115 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 HNRNPCP07910 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 MELTFP08582 738 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 TMEM225BP0DP42 221 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 IDH3GP51553 393 aaPredicted RBP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 PRSS12P56730 875 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 RPS27AP62979 156 aaKnown RBP12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 PCGF3Q3KNV8 242 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 SLC22A6Q4U2R8 563 aa12.54□□□□□ -0.4
POLR2J3-204ENST00000486319 AGAP6Q5VW22 663 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms