RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 F8VP50 259 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 RNASEK-C17orf49H0YIS7 233 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 hCG_2039718K7EN88 272 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 PLPP3O14495 311 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 PLIN3O60664 434 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 YEATS4O95619 227 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 HSPD1P10809 573 aaKnown RBP2.27□□□□□ -2.05
SMC4-215ENST00000484799 LIPCP11150 499 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 IL1RNP18510 177 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 PSMB5P28074 263 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 IL12BP29460 328 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 PRSS3P35030 304 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 GALR1P47211 349 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 CXCL12P48061 93 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 OR12D2P58182 307 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 TAS2R31P59538 309 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 C2orf80Q0P641 193 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 XRCC4Q13426 336 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 LY6EQ16553 131 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 C6orf99Q4VX62 202 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 TTC32Q5I0X7 151 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 ACTL10Q5JWF8 245 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 TMEM236Q5W0B7 351 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 RESP18Q5W5W9 173 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 Q6ZR03 302 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 Q6ZSR6 202 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 SETD3Q86TU7 594 aaPredicted RBP2.27□□□□□ -2.05
SMC4-215ENST00000484799 TMEM256Q8N2U0 113 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 DRAM1Q8N682 238 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 OR9A2Q8NGT5 310 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 OR51Q1Q8NH59 317 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 OR1L1Q8NH94 360 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 ANGPTL6Q8NI99 470 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 UBALD1Q8TB05 177 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 DEDD2Q8WXF8 326 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 CPB2Q96IY4 423 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 KCNS1Q96KK3 526 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 ALS2CR12Q96Q35 445 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 VAT1Q99536 393 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 TBL1YQ9BQ87 522 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 FGF23Q9GZV9 251 aaPredicted RBP2.27□□□□□ -2.05
SMC4-215ENST00000484799 ACOT13Q9NPJ3 140 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 CLEC2DQ9UHP7 191 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 TSSC4Q9Y5U2 329 aaPredicted RBP2.27□□□□□ -2.05
SMC4-215ENST00000484799 WIF1Q9Y5W5 379 aa2.27□□□□□ -2.05
SMC4-215ENST00000484799 AHDC1Q5TGY3 1603 aaPredicted RBP2.27□□□□□ -2.05
SMC4-215ENST00000484799 IGKV1-27A0A075B6S5 117 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 IGHV3-72A0A0B4J1Y9 119 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 A0A1B0GTI1 187 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 SLC5A10A0PJK1 596 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 CENPBD1B2RD01 187 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 H0YJW9 148 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 J3QT63 122 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 K7EN84 100 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 RBFOX2O43251 390 aaKnown RBP eCLIP2.26□□□□□ -2.05
SMC4-215ENST00000484799 SCO1O75880 301 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 LDOC1O95751 146 aaPredicted RBP2.26□□□□□ -2.05
SMC4-215ENST00000484799 CD74P04233 296 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 GIMD1P0DJR0 217 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 OPRK1P41145 380 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 HTR2BP41595 481 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 LAMTOR4Q0VGL1 99 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 LINC00483Q53H64 154 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 Q5W150 140 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 ERICH5Q6P6B1 374 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 EPGNQ6UW88 154 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 CYB561A3Q8NBI2 242 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 ACBD4Q8NC06 268 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 OR52P1PQ8NH57 321 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 ADTRPQ96IZ2 230 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 RILPQ96NA2 401 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 ZFP3Q96NJ6 502 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 TRNT1Q96Q11 434 aaKnown RBP2.26□□□□□ -2.05
SMC4-215ENST00000484799 CYTH2Q99418 400 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 CHCHD7Q9BUK0 85 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 TMED9Q9BVK6 235 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 SLC38A10Q9HBR0 1119 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 SPACA1Q9HBV2 294 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 C8orf17Q9NRJ1 99 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 NLE1Q9NVX2 485 aaPredicted RBP2.26□□□□□ -2.05
SMC4-215ENST00000484799 RBFOX1Q9NWB1 397 aaKnown RBP2.26□□□□□ -2.05
SMC4-215ENST00000484799 NXT1Q9UKK6 140 aaKnown RBP2.26□□□□□ -2.05
SMC4-215ENST00000484799 FADS3Q9Y5Q0 445 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 C2orf16Q68DN1 1984 aa2.26□□□□□ -2.05
SMC4-215ENST00000484799 TRIOBPQ9H2D6 2365 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 CENPVL3A0A0U1RRI6 287 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 GOLGA8IPA6NC78 632 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 M0R1X1 148 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 CETN3O15182 167 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 ZNF207O43670 478 aaKnown RBP2.25□□□□□ -2.05
SMC4-215ENST00000484799 CCDC22O60826 627 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 SERPINB7O75635 380 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 CD8AP01732 235 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 ME2P23368 584 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 MAP3K7CLP57077 242 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 STX4Q12846 297 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 MAPRE2Q15555 327 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 OR4D1Q15615 310 aa2.25□□□□□ -2.05
SMC4-215ENST00000484799 SNRNP35Q16560 246 aaKnown RBP2.25□□□□□ -2.05
SMC4-215ENST00000484799 SLC25A35Q3KQZ1 300 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms