RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ERMNQ8TAM6 284 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 NEIL3Q8TAT5 605 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 BLOC1S5Q8TDH9 187 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 BLNKQ8WV28 456 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 PGLYRP3Q96LB9 341 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 PACRGQ96M98 296 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-214ENST00000483925 WFIKKN1Q96NZ8 548 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 OPRPNQ99935 248 aaPredicted RBP3.35□□□□□ -1.87
PTCD3-214ENST00000483925 NRIP2Q9BQI9 281 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 EMC6Q9BV81 110 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 BCL2L14Q9BZR8 327 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 SLC19A3Q9BZV2 496 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 OR51B6Q9H340 312 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 CLMPQ9H6B4 373 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 CCL28Q9NRJ3 127 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 ZNF581Q9P0T4 197 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 TP53TG1Q9Y2A0 90 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 ORC6Q9Y5N6 252 aa3.35□□□□□ -1.87
PTCD3-214ENST00000483925 CEACAM18A8MTB9 384 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 EFCAB9A8MZ26 197 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 SHISA9B4DS77 424 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 F5H5T6 163 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 KLF8O95600 359 aaPredicted RBP3.34□□□□□ -1.87
PTCD3-214ENST00000483925 KRT75O95678 551 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 TCRBP04435 133 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 TYMSP04818 313 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 FUT3P21217 361 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 PAX6P26367 422 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 GDF1P27539 372 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 KIR3DL2P43630 455 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 OR3A4PP47883 348 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 PSMB2P49721 201 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 TAS2R46P59540 309 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 UBE2NP61088 152 aaKnown RBP3.34□□□□□ -1.87
PTCD3-214ENST00000483925 HERVK_113P61574 105 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 LSM6P62312 80 aaKnown RBP3.34□□□□□ -1.87
PTCD3-214ENST00000483925 SRSF6Q13247 344 aaKnown RBP3.34□□□□□ -1.87
PTCD3-214ENST00000483925 GUK1Q16774 197 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 SPIN3Q5JUX0 258 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 CST9Q5W186 159 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 LAMTOR1Q6IAA8 161 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 METTL7BQ6UX53 244 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 CASP12Q6UXS9 341 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 RFLNAQ6ZTI6 216 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 FAM92BQ6ZTR7 304 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 CCDC121Q6ZUS5 278 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 LINC00173Q6ZV60 143 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 FAM183BPQ6ZVS7 135 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 COX18Q8N8Q8 333 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 RAB8BQ92930 207 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 TLCD1Q96CP7 247 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 DNAJC19Q96DA6 116 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 METTL26Q96S19 204 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 NUDT9Q9BW91 350 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 CDCA4Q9BXL8 241 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 SLC22A4Q9H015 551 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 ZNF702PQ9H963 129 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 EDA2RQ9HAV5 297 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 TMEM27Q9HBJ8 222 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 UVRAGQ9P2Y5 699 aa3.34□□□□□ -1.87
PTCD3-214ENST00000483925 TRAV8-6A0A0B4J262 113 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 A0A0J9YXV3 536 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 CIB4A0PJX0 185 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 TAAR5O14804 337 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 AZIN1O14977 448 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 IGHV3-23P01764 117 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 IFNA16P05015 189 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 FABP3P05413 133 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 GIPP09681 153 aaPredicted RBP3.33□□□□□ -1.88
PTCD3-214ENST00000483925 TDGF1P13385 188 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 TCN2P20062 427 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 CXCR1P25024 350 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 PSMA1P25786 263 aaKnown RBP3.33□□□□□ -1.88
PTCD3-214ENST00000483925 TSPOP30536 169 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 GRPRP30550 384 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 IFNGR2P38484 337 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 CD79BP40259 229 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 CDKN2BP42772 138 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 GCLMP48507 274 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 PSMD7P51665 324 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 TDGF1P3P51864 188 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 SYNJ2BPP57105 145 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 OR4D2P58180 307 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 POLR2GP62487 172 aaKnown RBP eCLIP3.33□□□□□ -1.88
PTCD3-214ENST00000483925 FAM3AP98173 230 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 INCA1Q0VD86 236 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 LAMTOR4Q0VGL1 99 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 FAM53BQ14153 422 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 PDK2Q15119 407 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 PRSS8Q16651 343 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 CEACAM16Q2WEN9 425 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 ZNF613Q6PF04 617 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 PAMR1Q6UXH9 720 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 AKAP14Q86UN6 197 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 NT5DC3Q86UY8 548 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 SLC25A42Q86VD7 318 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 LGI3Q8N145 548 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 STK40Q8N2I9 435 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 OR10G6Q8NH81 332 aa3.33□□□□□ -1.88
PTCD3-214ENST00000483925 RERGQ96A58 199 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms