RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PCCAP05165 728 aaPredicted RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 IL6P05231 212 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 RPS17P08708 135 aaKnown RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 CSF3P09919 207 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 OR8U8P0C7N1 319 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 RBMY1DP0C7P1 496 aaKnown RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 GKN3PP0CG01 181 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 RBMY1A1P0DJD3 496 aaKnown RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 PGA4P0DJD7 388 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 PGA3P0DJD8 388 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 OR5H8P0DN80 308 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 THRAP10827 490 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ERGP11308 486 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 CD1EP15812 388 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 TCP1P17987 556 aaKnown RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 MYL12AP19105 171 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 CD79BP40259 229 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 MDH2P40926 338 aaKnown RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 VDAC2P45880 294 aaPredicted RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 CAPZBP47756 277 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SLC25A1P53007 311 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 AQP5P55064 265 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 OR10A3P58181 314 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 MTPNP58546 118 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 TAS2R19P59542 299 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ARPC4P59998 168 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 CXCR4P61073 352 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ERVS71-1P61550 626 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SRSF6Q13247 344 aaKnown RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ARFRP1Q13795 201 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SGCAQ16586 387 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 GSG1Q2KHT4 349 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SPIN4Q56A73 249 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SPIN3Q5JUX0 258 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 UGT2A3Q6UWM9 527 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 CXCL17Q6UXB2 119 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 C12orf54Q6X4T0 127 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ZNF620Q6ZNG0 422 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 TEX43Q6ZNM6 134 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 CCDC121Q6ZUS5 278 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 TRAPPC5Q8IUR0 188 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 C10orf107Q8IVU9 208 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ITPRIPQ8IWB1 547 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 KIR2DL5AQ8N109 375 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 STK40Q8N2I9 435 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 C6orf223Q8N319 242 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ATPAF2Q8N5M1 289 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 NPWQ8N729 165 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 OR5M1Q8NGP8 315 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 OR10J6PQ8NGY7 276 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 OR2G3Q8NGZ4 309 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 OR1S1Q8NH92 325 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 OR2AE1Q8NHA4 323 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 KIR2DL5BQ8NHK3 375 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 GEMIN6Q8WXD5 167 aaKnown RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 RGP1Q92546 391 aaPredicted RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 HGDQ93099 445 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 CREB3L1Q96BA8 519 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 FAM3DQ96BQ1 224 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 DDIT4LQ96D03 193 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SMIM12Q96EX1 92 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 MRAP2Q96G30 205 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 RNF145Q96MT1 663 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 MBOAT7Q96N66 472 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SIGLEC12Q96PQ1 595 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 GPR22Q99680 433 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 EBNA1BP2Q99848 306 aaKnown RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 EBF4Q9BQW3 602 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 C19orf24Q9BVV8 132 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SLC22A4Q9H015 551 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 METTL9Q9H1A3 318 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ARV1Q9H2C2 271 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SLC25A22Q9H936 323 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SH2D2AQ9NP31 389 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 MIEF1Q9NQG6 463 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 RBM22Q9NW64 420 aaKnown RBP eCLIP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 PAQR5Q9NXK6 330 aaPredicted RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 TRMT112Q9UI30 125 aaKnown RBP2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ANXA10Q9UJ72 324 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 TP53TG5Q9Y2B4 290 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 ZNF257Q9Y2Q1 563 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 SIGLEC9Q9Y336 463 aa2.03□□□□□ -2.08
LAPTM4A-202ENST00000483117 EIF3AQ14152 1382 aaKnown RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 ANKRD30AQ9BXX3 1397 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 IGKV1D-13A0A0B4J2D9 117 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 DAPL1A0PJW8 107 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 C21orf140B9A014 251 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 F5H768 121 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 LINC01619G3V211 115 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 K7N7A8 449 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 CXCR6O00574 342 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 RAD1O60671 282 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 IFNA16P05015 189 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 BCHEP06276 602 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 IGKV1-13P0DP09 117 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 CD37P11049 281 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 UCHL3P15374 230 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 UGT2B7P16662 529 aa2.02□□□□□ -2.09
LAPTM4A-202ENST00000483117 GABRG2P18507 467 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 303.6 ms