RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 NGFRP08138 427 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 PAX1P15863 534 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 PSMB1P20618 241 aaKnown RBP5.48□□□□□ -1.53
CLK1-212ENST00000482590 AADACP22760 399 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 GLRA1P23415 457 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 GCAP28676 217 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 EIF1P41567 113 aaKnown RBP5.48□□□□□ -1.53
CLK1-212ENST00000482590 MRPL19P49406 292 aaKnown RBP5.48□□□□□ -1.53
CLK1-212ENST00000482590 ISL1P61371 349 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 POLR2GP62487 172 aaKnown RBP eCLIP5.48□□□□□ -1.53
CLK1-212ENST00000482590 FOXF1Q12946 379 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 KLF5Q13887 457 aaPredicted RBP5.48□□□□□ -1.53
CLK1-212ENST00000482590 ZNF239Q16600 458 aaKnown RBP5.48□□□□□ -1.53
CLK1-212ENST00000482590 CCDC153Q494R4 210 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 DNAL1Q4LDG9 190 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 CLVS2Q5SYC1 327 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 CPTPQ5TA50 214 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 ANKRD26P1Q6NSI1 321 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 APOOLQ6UXV4 268 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 LRRC74BQ6ZQY2 392 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 SH2D5Q6ZV89 423 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 C5orf24Q7Z6I8 188 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 CATSPERDQ86XM0 798 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 ERI1Q8IV48 349 aaKnown RBP5.48□□□□□ -1.53
CLK1-212ENST00000482590 GBGT1Q8N5D6 347 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 ZNF614Q8N883 585 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 LRTM2Q8N967 370 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 OR13C5Q8NGS8 318 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 FAM110BQ8TC76 370 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 ZFP90Q8TF47 636 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 ABHD3Q8WU67 409 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 S100PBPQ96BU1 408 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 ADGRG7Q96K78 797 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 C7orf50Q9BRJ6 194 aaKnown RBP5.48□□□□□ -1.53
CLK1-212ENST00000482590 TMEM204Q9BSN7 226 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 DCTN5Q9BTE1 182 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 RACGAP1Q9H0H5 632 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 SLC38A1Q9H2H9 487 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 REEP4Q9H6H4 257 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 LRTM1Q9HBL6 345 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 UBQLN4Q9NRR5 601 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 INPP5EQ9NRR6 644 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 C1orf109Q9NX04 203 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 MYEF2Q9P2K5 600 aaKnown RBP5.48□□□□□ -1.53
CLK1-212ENST00000482590 GHRLQ9UBU3 117 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 MRM2Q9UI43 246 aaKnown RBP5.48□□□□□ -1.53
CLK1-212ENST00000482590 CUBNO60494 3623 aa5.48□□□□□ -1.53
CLK1-212ENST00000482590 TEX13DA0A0J9YY54 714 aaPredicted RBP5.47□□□□□ -1.53
CLK1-212ENST00000482590 H3BNH8 94 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 UBFD1O14562 309 aaKnown RBP5.47□□□□□ -1.53
CLK1-212ENST00000482590 COPEO14579 308 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 CCSO14618 274 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 AZIN1O14977 448 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 MLNRO43193 412 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 AIREO43918 545 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 RAMP3O60896 148 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 NDUFS7O75251 213 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 CRLF1O75462 422 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 KCNK2O95069 426 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 ALPLP05186 524 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 KRT16P08779 473 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 H2BFMP0C1H6 154 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 ANXA3P12429 323 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 SDC1P18827 310 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 GIFP27352 417 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 RPL3P39023 403 aaKnown RBP5.47□□□□□ -1.53
CLK1-212ENST00000482590 RPL13AP40429 203 aaKnown RBP5.47□□□□□ -1.53
CLK1-212ENST00000482590 THBS3P49746 956 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 P2RX1P51575 399 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 NANOS2P60321 138 aaKnown RBP5.47□□□□□ -1.53
CLK1-212ENST00000482590 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
CLK1-212ENST00000482590 ZNF117Q03924 483 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 LGALS3BPQ08380 585 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 SELENBP1Q13228 472 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 ATXN7L3Q14CW9 347 aaPredicted RBP5.47□□□□□ -1.53
CLK1-212ENST00000482590 TAB1Q15750 504 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 CD226Q15762 336 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 CHI3L2Q15782 390 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 DUSP5Q16690 384 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 C5orf47Q569G3 176 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 NCMAPQ5T1S8 102 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 CCNJQ5T5M9 372 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 GPR107Q5VW38 600 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 PAQR6Q6TCH4 344 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 TFAP2EQ6VUC0 442 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 UTS2BQ765I0 119 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 FCRLAQ7L513 359 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 IFT20Q8IY31 132 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 KBTBD8Q8NFY9 601 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 ENKURQ8TC29 256 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 IGFBPL1Q8WX77 278 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 CDS1Q92903 461 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 STACQ99469 402 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 DGCR6LQ9BY27 220 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 SLC17A5Q9NRA2 495 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 FAIMQ9NVQ4 179 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 GIN1Q9NXP7 522 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 IL36GQ9NZH8 169 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 URGCP-MRPS24S4R325 110 aa5.47□□□□□ -1.53
CLK1-212ENST00000482590 MALRD1Q5VYJ5 2156 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms