RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.46□□□□□ -0.9
CCM2-213ENST00000480658 SPRY1O43609 319 aaPredicted RBP9.46□□□□□ -0.9
CCM2-213ENST00000480658 NDUFA7O95182 113 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 PAHP00439 452 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 SERPINA3P01011 423 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 MRPL3P09001 348 aaKnown RBP9.46□□□□□ -0.9
CCM2-213ENST00000480658 ACAA1P09110 424 aaPredicted RBP9.46□□□□□ -0.9
CCM2-213ENST00000480658 EGR1P18146 543 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 HTR1FP30939 366 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 TGM4P49221 684 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 HNRNPA0Q13151 305 aaKnown RBP9.46□□□□□ -0.9
CCM2-213ENST00000480658 IKZF1Q13422 519 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 DEFB112Q30KQ8 113 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 PRR31Q5SQ13 230 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 AADACL4Q5VUY2 407 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 FIP1L1Q6UN15 594 aaKnown RBP9.46□□□□□ -0.9
CCM2-213ENST00000480658 ZNF788Q6ZQV5 615 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 C17orf107Q6ZR85 190 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 VMO1Q7Z5L0 202 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 ELMOD2Q8IZ81 293 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 BCL6BQ8N143 479 aaPredicted RBP9.46□□□□□ -0.9
CCM2-213ENST00000480658 OR5R1Q8NH85 324 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 ANGPTL6Q8NI99 470 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 OR51E1Q8TCB6 317 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 HPSE2Q8WWQ2 592 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 RPL3LQ92901 407 aaKnown RBP9.46□□□□□ -0.9
CCM2-213ENST00000480658 LHX4Q969G2 390 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 LYZL4Q96KX0 146 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 IL4I1Q96RQ9 567 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 TBX15Q96SF7 602 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 ADI1Q9BV57 179 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 OR51I2Q9H344 312 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 ADGRL4Q9HBW9 690 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 NEK6Q9HC98 313 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 IMPAD1Q9NX62 359 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 OR52A1Q9UKL2 312 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 GTF2A1LQ9UNN4 478 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 SLC7A11Q9UPY5 501 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 KLHDC2Q9Y2U9 406 aa9.46□□□□□ -0.9
CCM2-213ENST00000480658 IGHV3OR15-7A0A075B7D8 119 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 IGHV3OR16-10A0A075B7F0 116 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 J3QT63 122 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 AKR7A2O43488 359 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 NOS1APO75052 506 aaPredicted RBP9.45□□□□□ -0.9
CCM2-213ENST00000480658 SFTPBP07988 381 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 MELTFP08582 738 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 UBCP0CG48 685 aaKnown RBP9.45□□□□□ -0.9
CCM2-213ENST00000480658 NDUFB7P17568 137 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 ANOS1P23352 680 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 ARF6P62330 175 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 EFNB1P98172 346 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 CNN3Q15417 329 aaKnown RBP9.45□□□□□ -0.9
CCM2-213ENST00000480658 CEP78Q5JTW2 689 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 MEDAGQ5VYS4 303 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 PLEKHG7Q6ZR37 379 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 KCTD20Q7Z5Y7 419 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 EGFL6Q8IUX8 553 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 Q8IYB0 196 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 FAM216BQ8N7L0 139 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 POC1AQ8NBT0 407 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 HAVCR2Q8TDQ0 301 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 H1FXQ92522 213 aaKnown RBP9.45□□□□□ -0.9
CCM2-213ENST00000480658 SDSLQ96GA7 329 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 C1orf147Q96MC9 270 aaPredicted RBP9.45□□□□□ -0.9
CCM2-213ENST00000480658 CIB1Q99828 191 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 PKIBQ9C010 78 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 FAM234AQ9H0X4 552 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 PCDHGB1Q9Y5G3 927 aa9.45□□□□□ -0.9
CCM2-213ENST00000480658 CYB5AP00167 134 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 KNG1P01042 644 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 TTRP02766 147 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 CCL1P22362 96 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 HAAOP46952 286 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 UBE2E1P51965 193 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 RAG2P55895 527 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 ACTA2P62736 377 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 ACTG2P63267 376 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 MIDNQ504T8 468 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 TMEM42Q69YG0 159 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 HAGHLQ6PII5 290 aaPredicted RBP9.44□□□□□ -0.9
CCM2-213ENST00000480658 Q6ZSR3 168 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 MOB3CQ70IA8 216 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 CALHM1Q8IU99 346 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 YIPF7Q8N8F6 280 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 OR51G2Q8NGK0 314 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 PP6455Q8WZ26 134 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 AQP3Q92482 292 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 DUX5Q96PT3 197 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 RAB18Q9NP72 206 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 OAZ3Q9UMX2 235 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 SF3B6Q9Y3B4 125 aaKnown RBP9.44□□□□□ -0.9
CCM2-213ENST00000480658 V9GYS6 101 aa9.44□□□□□ -0.9
CCM2-213ENST00000480658 WNK2Q9Y3S1 2297 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 ANKRD61A6NGH8 418 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 METTL15A6NJ78 407 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 H0YAE9 185 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 PSMD9O00233 223 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 SYT7O43581 403 aa9.43□□□□□ -0.9
CCM2-213ENST00000480658 MPZL2O60487 215 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms