RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 PPIL3Q9H2H8 161 aaKnown RBP9.47□□□□□ -0.89
CLDN11-205ENST00000480067 OR51I2Q9H344 312 aa9.47□□□□□ -0.89
CLDN11-205ENST00000480067 DLL4Q9NR61 685 aa9.47□□□□□ -0.89
CLDN11-205ENST00000480067 GSTK1Q9Y2Q3 226 aa9.47□□□□□ -0.89
CLDN11-205ENST00000480067 hCG_1807616A0A1W2PRN6 198 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 MEGF11A6BM72 1044 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 LYNX1G3V0Z9 82 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 IFNL4K9M1U5 179 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 CDIPTO14735 213 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 AIREO43918 545 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 PTBP3O95758 552 aaKnown RBP9.46□□□□□ -0.89
CLDN11-205ENST00000480067 MAS1P04201 325 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 ALDOBP05062 364 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 LYNX1P0DP58 116 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 IRF2P14316 349 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 IGFBP3P17936 291 aaPredicted RBP9.46□□□□□ -0.89
CLDN11-205ENST00000480067 FSTP19883 344 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 COL8A2P25067 703 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 BDKRB2P30411 391 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 FGF9P31371 208 aaPredicted RBP9.46□□□□□ -0.89
CLDN11-205ENST00000480067 KISS1Q15726 138 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 CARTPTQ16568 116 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 ASPHD2Q6ICH7 369 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 WDR86Q86TI4 376 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 SATL1Q86VE3 508 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 ANGPTL5Q86XS5 388 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 LRRC75A-AS1Q8N1F1 130 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 OR11L1Q8NGX0 322 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 RPL3LQ92901 407 aaKnown RBP9.46□□□□□ -0.89
CLDN11-205ENST00000480067 HPS1Q92902 700 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 YIPF6Q96EC8 236 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 MYOZ1Q9NP98 299 aaPredicted RBP9.46□□□□□ -0.89
CLDN11-205ENST00000480067 SNTG1Q9NSN8 517 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 C1orf123Q9NWV4 160 aa9.46□□□□□ -0.89
CLDN11-205ENST00000480067 TXNL4BQ9NX01 149 aaKnown RBP9.46□□□□□ -0.89
CLDN11-205ENST00000480067 MYL9P24844 172 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 HAGHLQ6PII5 290 aaPredicted RBP9.46□□□□□ -0.9
CLDN11-205ENST00000480067 GDPGP1Q6ZNW5 385 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 ZNF525Q8N782 197 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 SCCPDHQ8NBX0 429 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 OR52N4Q8NGI2 321 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 ZNF420Q8TAQ5 688 aaPredicted RBP9.46□□□□□ -0.9
CLDN11-205ENST00000480067 ZNF671Q8TAW3 534 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 SPACA5Q96QH8 159 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 GPER1Q99527 375 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 FUNDC2Q9BWH2 189 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 CHODLQ9H9P2 273 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 TMEM106BQ9NUM4 274 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 CACNG2Q9Y698 323 aa9.46□□□□□ -0.9
CLDN11-205ENST00000480067 ARID1AO14497 2285 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 CCDC168Q8NDH2 2452 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 IGKV1-27A0A075B6S5 117 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 CYB5AP00167 134 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 PLATP00750 562 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 ZNF93P35789 620 aaPredicted RBP9.45□□□□□ -0.9
CLDN11-205ENST00000480067 PMELP40967 661 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 TMEM33P57088 247 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 DDI2Q5TDH0 399 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 GPR107Q5VW38 600 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 CLEC2AQ6UVW9 174 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 ZNF826PQ6ZT77 177 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 PEG10Q86TG7 708 aaKnown RBP9.45□□□□□ -0.9
CLDN11-205ENST00000480067 CALHM1Q8IU99 346 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 TGIF2LYQ8IUE0 185 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 C11orf53Q8IXP5 236 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 C1orf87Q8N0U7 546 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 JAGN1Q8N5M9 183 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 NKAIN3Q8N8D7 197 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 Q8TCH9 128 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 YIPF5Q969M3 257 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 RFT1Q96AA3 541 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 KCTD7Q96MP8 289 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 TLNRD1Q9H1K6 362 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 RNF7Q9UBF6 113 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 POLDIP2Q9Y2S7 368 aa9.45□□□□□ -0.9
CLDN11-205ENST00000480067 TEX15Q9BXT5 2789 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 TRAV1-2A0A0B4J238 106 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 TRIM64BA6NI03 449 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 J3QT63 122 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 CSF3P09919 207 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 TMEM225BP0DP42 221 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 POU3F4P49335 361 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 PDLIM4P50479 330 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 PSMD7P51665 324 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 DSCR9P59020 149 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 LSM3P62310 102 aaKnown RBP9.44□□□□□ -0.9
CLDN11-205ENST00000480067 PDZK1IP1Q13113 114 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 ZNF181Q2M3W8 571 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 GLT8D1Q68CQ7 371 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 WDR82Q6UXN9 313 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 SLC25A26Q70HW3 274 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 LRRTM1Q86UE6 522 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 CDH26Q8IXH8 852 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 MKXQ8IYA7 352 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 PNLDC1Q8NA58 520 aaKnown RBP9.44□□□□□ -0.9
CLDN11-205ENST00000480067 OR5D18Q8NGL1 313 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 AQP3Q92482 292 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 FAM168AQ92567 244 aa9.44□□□□□ -0.9
CLDN11-205ENST00000480067 FOXRED1Q96CU9 486 aaPredicted RBP9.44□□□□□ -0.9
CLDN11-205ENST00000480067 CENPOQ9BU64 300 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms