RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 UAP1Q16222 522 aaPredicted RBP3.93□□□□□ -1.78
UPF3A-205ENST00000479712 METTL11BQ5VVY1 283 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 OR5M10Q6IEU7 315 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 CGB2Q6NT52 195 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 CLEC2AQ6UVW9 174 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 MYPOPQ86VE0 399 aaPredicted RBP3.93□□□□□ -1.78
UPF3A-205ENST00000479712 SLC22A9Q8IVM8 553 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 SLC35F2Q8IXU6 374 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 RIBC1Q8N443 379 aaPredicted RBP3.93□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF525Q8N782 197 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 ACOT4Q8N9L9 421 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 MORN4Q8NDC4 146 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 B3GNT7Q8NFL0 401 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 OR5T3Q8NGG3 340 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 L3HYPDHQ96EM0 354 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 NOL4LQ96MY1 436 aaPredicted RBP3.93□□□□□ -1.78
UPF3A-205ENST00000479712 FOXN4Q96NZ1 517 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 WFIKKN1Q96NZ8 548 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF382Q96SR6 550 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 SERPINI1Q99574 410 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 MCHR1Q99705 422 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 RHOXF2Q9BQY4 288 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 UTP23Q9BRU9 249 aaKnown RBP3.93□□□□□ -1.78
UPF3A-205ENST00000479712 SLC35A5Q9BS91 424 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF385DQ9H6B1 395 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 ADAP2Q9NPF8 381 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 PRTFDC1Q9NRG1 225 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 NECAP2Q9NVZ3 263 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 NMRK1Q9NWW6 199 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 LYARQ9NX58 379 aaKnown RBP3.93□□□□□ -1.78
UPF3A-205ENST00000479712 AHSPQ9NZD4 102 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 DCDC2Q9UHG0 476 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 PCTPQ9UKL6 214 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 TIMM10BQ9Y5J6 103 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 U3KQK5 164 aa3.93□□□□□ -1.78
UPF3A-205ENST00000479712 A0A0A6YYD5 115 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF860A6NHJ4 632 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 A8MT66 165 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 SULT2B1O00204 365 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 PLPP1O14494 284 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 PRKYO43930 277 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF254O75437 659 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 KRT6AP02538 564 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 THY1P04216 161 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 RBMY1A1P0DJD3 496 aaKnown RBP3.92□□□□□ -1.78
UPF3A-205ENST00000479712 POU2F1P14859 743 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 SLC25A16P16260 332 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 SSR2P43308 183 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 CCT3P49368 545 aaKnown RBP3.92□□□□□ -1.78
UPF3A-205ENST00000479712 PRKXP51817 358 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 CCNG1P51959 295 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 RAP1GDS1P52306 607 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 DNAJB13P59910 316 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 BTG2P78543 158 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 LRRC74AQ0VAA2 488 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 IFT88Q13099 833 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 GSG1Q2KHT4 349 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 TRIM16LQ309B1 348 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 CCDC153Q494R4 210 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF678Q5SXM1 525 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 OLFML2AQ68BL7 652 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 RNF165Q6ZSG1 346 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 PAGE2Q7Z2X7 111 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF550Q7Z398 422 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 RPS19BP1Q86WX3 136 aaKnown RBP3.92□□□□□ -1.78
UPF3A-205ENST00000479712 MREGQ8N565 214 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 APCDD1LQ8NCL9 501 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 TSLPQ969D9 159 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 RBM14Q96PK6 669 aaKnown RBP3.92□□□□□ -1.78
UPF3A-205ENST00000479712 NIPSNAP3BQ9BS92 247 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 TMEM109Q9BVC6 243 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF717Q9BY31 904 aaPredicted RBP3.92□□□□□ -1.78
UPF3A-205ENST00000479712 ROPN1BQ9BZX4 212 aaPredicted RBP3.92□□□□□ -1.78
UPF3A-205ENST00000479712 NUDT15Q9NV35 164 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 ABCD2Q9UBJ2 740 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 WARS2Q9UGM6 360 aaKnown RBP3.92□□□□□ -1.78
UPF3A-205ENST00000479712 LGALS13Q9UHV8 139 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 POLDIP2Q9Y2S7 368 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 FLVCR1Q9Y5Y0 555 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 EXPH5Q8NEV8 1989 aa3.92□□□□□ -1.78
UPF3A-205ENST00000479712 FAM166BA8MTA8 275 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 ZNF705EA8MWA4 302 aaPredicted RBP3.91□□□□□ -1.78
UPF3A-205ENST00000479712 BCKDKO14874 412 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 BCL2L11O43521 198 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 GPR75O95800 540 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 IGKV3-11P04433 115 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 IFI6P09912 130 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 PTNP21246 168 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 VDAC1P21796 283 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 CPN2P22792 545 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 CRYGSP22914 178 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 FASP25445 335 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 FGF9P31371 208 aaPredicted RBP3.91□□□□□ -1.78
UPF3A-205ENST00000479712 GCKP35557 465 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 SERPINB5P36952 375 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 TAGLN2P37802 199 aaKnown RBP3.91□□□□□ -1.78
UPF3A-205ENST00000479712 MAGEA8P43361 318 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 HLCSP50747 726 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 EFNB2P52799 333 aa3.91□□□□□ -1.78
UPF3A-205ENST00000479712 KRTAP10-3P60369 221 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms