RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 MALRD1Q5VYJ5 2156 aa17.15■□□□□ 0.34
VARS-224ENST00000479051 SLC1A7O00341 560 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 CRLF1O75462 422 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 WNT2P09544 360 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 GNB2P62879 340 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 LCN2P80188 198 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 CR1LQ2VPA4 569 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 DMRTC1Q5HYR2 192 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 TEX36Q5VZQ5 186 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 HAGHLQ6PII5 290 aaPredicted RBP17.14■□□□□ 0.33
VARS-224ENST00000479051 MYDGFQ969H8 173 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 NEK6Q9HC98 313 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 ERVK-18Q9QC07 812 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 DNAJB11Q9UBS4 358 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 CLEC2DQ9UHP7 191 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 POLDIP2Q9Y2S7 368 aa17.14■□□□□ 0.33
VARS-224ENST00000479051 ABCA2Q9BZC7 2435 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 A0A0G2JMP0 313 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 A0A0X1KG70 313 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 SRRM5B3KS81 715 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 E9PI62 339 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 ZFPL1O95159 310 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 OCM2P0CE71 109 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 OCMP0CE72 109 aaPredicted RBP17.13■□□□□ 0.33
VARS-224ENST00000479051 EGR1P18146 543 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 GATA3P23771 443 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 HAAOP46952 286 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 PITPNBP48739 271 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 FUT6P51993 359 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 TEX29Q8N6K0 151 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 OR4M2Q8NGB6 313 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 GATAD2BQ8WXI9 593 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 FGGYQ96C11 551 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 C12orf43Q96C57 262 aaKnown RBP17.13■□□□□ 0.33
VARS-224ENST00000479051 PDCD1LG2Q9BQ51 273 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 SSBP3Q9BWW4 388 aaPredicted RBP17.13■□□□□ 0.33
VARS-224ENST00000479051 OR5V1Q9UGF6 321 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 RAB26Q9ULW5 256 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 ERGIC3Q9Y282 383 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 TPRKBQ9Y3C4 175 aa17.13■□□□□ 0.33
VARS-224ENST00000479051 FAM230AA0A1W2PPH8 454 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 PQLC2LA1A4F0 135 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 A8MXK9 166 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 J3QT63 122 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 AKR7A2O43488 359 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 ADAM20O43506 726 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 PRKACBP22694 351 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 NPY4RP50391 375 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 TAS2R43P59537 309 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 CDK5R1Q15078 307 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 FAM120AOSQ5T036 256 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 DCAF12L2Q5VW00 463 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 UTS2BQ765I0 119 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 TRMT10AQ8TBZ6 339 aaKnown RBP17.12■□□□□ 0.33
VARS-224ENST00000479051 TSEN15Q8WW01 171 aaKnown RBP17.12■□□□□ 0.33
VARS-224ENST00000479051 AQP3Q92482 292 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 ADAT3Q96EY9 351 aaPredicted RBP17.12■□□□□ 0.33
VARS-224ENST00000479051 BORCS8Q96FH0 119 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 FKBP14Q9NWM8 211 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 CLN8Q9UBY8 286 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 DHDHQ9UQ10 334 aa17.12■□□□□ 0.33
VARS-224ENST00000479051 FN1P02751 2386 aaKnown RBP17.12■□□□□ 0.33
VARS-224ENST00000479051 IGHV3OR15-7A0A075B7D8 119 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 PPIAL4CA0A0B4J2A2 164 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 PTGES3LE9PB15 166 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 J3QLI3 93 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 GYPAP02724 150 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 GLRA1P23415 457 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 GTF2A1P52655 376 aaPredicted RBP17.11■□□□□ 0.33
VARS-224ENST00000479051 GMFBP60983 142 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 SEC61A1P61619 476 aaKnown RBP17.11■□□□□ 0.33
VARS-224ENST00000479051 HOXA4Q00056 320 aaPredicted RBP17.11■□□□□ 0.33
VARS-224ENST00000479051 UBE2V2Q15819 145 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 FAHD2BQ6P2I3 314 aaPredicted RBP17.11■□□□□ 0.33
VARS-224ENST00000479051 FAM90A1Q86YD7 464 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 OR51A4Q8NGJ6 313 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 OR10AC1Q8NH08 325 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 NPRL2Q8WTW4 380 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 FAHD2AQ96GK7 314 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 Q9H521 79 aa17.11■□□□□ 0.33
VARS-224ENST00000479051 SONP18583 2426 aaKnown RBP17.11■□□□□ 0.33
VARS-224ENST00000479051 SETD2Q9BYW2 2564 aaPredicted RBP17.1■□□□□ 0.33
VARS-224ENST00000479051 NIPBLQ6KC79 2804 aaeCLIP17.1■□□□□ 0.33
VARS-224ENST00000479051 RHBDL1O75783 438 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 CDK1P06493 297 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 ATF1P18846 271 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 C21orf33P30042 268 aaPredicted RBP17.1■□□□□ 0.33
VARS-224ENST00000479051 ATP1B3P54709 279 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 WNT4P56705 351 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 LYPD2Q6UXB3 125 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 SLC36A1Q7Z2H8 476 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 DNAAF1Q8NEP3 725 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 GPR148Q8TDV2 347 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 SPSB1Q96BD6 273 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 TMIGD2Q96BF3 282 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 SMIM19Q96E16 107 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 CNBD2Q96M20 576 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 PKIBQ9C010 78 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 RASL12Q9NYN1 266 aa17.1■□□□□ 0.33
VARS-224ENST00000479051 POLR3KQ9Y2Y1 108 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms