RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GPR157Q5UAW9 335 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 ANKRD22Q5VYY1 191 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF470Q6ECI4 717 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CTRB2Q6GPI1 263 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 NIPAL1Q6NVV3 410 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 RNASEKQ6P5S7 137 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 RNF165Q6ZSG1 346 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 PNKDQ8N490 385 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 LINC01555Q8NAE3 123 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 C20orf203Q8NBC4 194 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 BBOF1Q8ND07 529 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 SPATA4Q8NEY3 305 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR9G1Q8NH87 305 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CD200R1Q8TD46 325 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 RPUSD4Q96CM3 377 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CERS2Q96G23 380 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 SNF8Q96H20 258 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 ATP6V1G3Q96LB4 118 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 BIRC8Q96P09 236 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 MS4A4EQ96PG1 132 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR8B4Q96RC9 309 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 MBOAT4Q96T53 435 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 EBNA1BP2Q99848 306 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 SH3GL1Q99961 368 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR11A1Q9GZK7 315 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 ILKAPQ9H0C8 392 aaPredicted RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 PCBD2Q9H0N5 130 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 WDR54Q9H977 334 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 POPDC3Q9HBV1 291 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CHRAC1Q9NRG0 131 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 GLRX2Q9NS18 164 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 C14orf105Q9NVL8 296 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CLCF1Q9UBD9 225 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 FBXO5Q9UKT4 447 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 CSDC2Q9Y534 153 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 NINQ8N4C6 2090 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 NBASA2RRP1 2371 aa2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 SPTBN1Q01082 2364 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-212ENST00000478573 ICE1Q9Y2F5 2266 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 MPDZO75970 2070 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF407Q9C0G0 2248 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 IGLV3-12A0A075B6K2 115 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 IQCF5A8MTL0 148 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 C12orf71A8MTZ7 269 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 H0YHG0 523 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 J3QKU1 62 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 TXNDC9O14530 226 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 MGRN1O60291 552 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 DPM1O60762 260 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 NPIPB7O75200 414 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 ATP5HO75947 161 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR2B3O76000 313 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 PRB1P04280 392 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 C2P06681 752 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 CT62P0C5K7 136 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 RHOXF2BP0C7M4 288 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 TROVE2P10155 538 aaKnown RBP eCLIP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF43P17038 809 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 F8A1P23610 371 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 IVDP26440 423 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 IMPA1P29218 277 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 IFNA8P32881 189 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 RPA3P35244 121 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 NPBWR2P48146 333 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 TFPI2P48307 235 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 MNAT1P51948 309 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 FBXW4P57775 412 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 RPS15AP62244 130 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 TBPL1P62380 186 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 SKP1P63208 163 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 DCDP81605 110 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 DR1Q01658 176 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 CAV1Q03135 178 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 PSG7Q13046 419 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 DAZ2Q13117 558 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 NAB1Q13506 487 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 NRF1Q16656 503 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 DEFB110Q30KQ9 67 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 TENM4Q6N022 2769 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 C8orf74Q6P047 294 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 PRMT9Q6P2P2 845 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF620Q6ZNG0 422 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 CCDC121Q6ZUS5 278 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 COX15Q7KZN9 410 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 PDIK1LQ8N165 341 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 INTS1Q8N201 2190 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR4E2Q8NGC2 313 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR2A1Q8NGT9 310 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR2Y1Q8NGV0 311 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 NAT14Q8WUY8 206 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 ARPC1AQ92747 370 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 SORT1Q99523 831 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 GPR21Q99679 349 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 KCTD14Q9BQ13 255 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 RHOXF2Q9BQY4 288 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 PELOQ9BRX2 385 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC7A5P2Q9GIP4 190 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 XKR8Q9H6D3 395 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 FAM60AQ9NP50 221 aa2.72□□□□□ -1.97
CDC42BPA-212ENST00000478573 MRPS30Q9NP92 439 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms